PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
LalaLA_C700550052880 Alkaloid PYKS high pass
LalaLA_scaffold11120072490 Alkaloid PYKS high pass
LalaLA_scaffold11510080110 Alkaloid PYKS low borderline
LalaLA_scaffold11750083730 Alkaloid PYKS high pass
LalaLA_scaffold15000122250 Alkaloid PYKS medium pass
LalaLA_scaffold15710133720 Alkaloid PYKS low borderline
LalaLA_scaffold15710133730 Alkaloid PYKS low borderline
LalaLA_scaffold16250140050 Alkaloid PYKS low borderline
LalaLA_scaffold18400163660 Alkaloid PYKS low borderline
LalaLA_scaffold18460164440 Alkaloid PYKS high pass
LalaLA_scaffold20040177990 Alkaloid PYKS low borderline
LalaLA_scaffold22390200860 Alkaloid PYKS low borderline
LalaLA_scaffold23700211570 Alkaloid PYKS low borderline
LalaLA_scaffold27720242360 Alkaloid PYKS low borderline
LalaLA_scaffold28330245840 Alkaloid PYKS low borderline
LalaLA_scaffold31590266360 Alkaloid PYKS high pass
LalaLA_scaffold3180267780 Alkaloid PYKS low borderline
LalaLA_scaffold33850278820 Alkaloid PYKS high pass
LalaLA_scaffold35070287560 Alkaloid PYKS low borderline
LalaLA_scaffold3610294530 Alkaloid PYKS low borderline
LalaLA_scaffold5730322250 Alkaloid PYKS low borderline
LalaLA_scaffold6000328340 Alkaloid PYKS medium pass
LalaLA_scaffold6000328970 Alkaloid PYKS low borderline
LalaLA_scaffold6110331100 Alkaloid PYKS low borderline
LalaLA_scaffold6610336800 Alkaloid PYKS low borderline
LalaLA_scaffold6650337350 Alkaloid PYKS low borderline
LalaLA_scaffold740349000 Alkaloid PYKS low borderline
LalaLA_scaffold7430349760 Alkaloid PYKS low borderline
LalaLA_scaffold8140357560 Alkaloid PYKS low borderline
LalaLA_scaffold8280358920 Alkaloid PYKS low borderline
LalaLA_scaffold8460362650 Alkaloid PYKS low borderline
LalaLA_scaffold8570363930 Alkaloid PYKS low borderline
LalaLA_scaffold8730367830 Alkaloid PYKS low borderline
LalaLA_scaffold8950371820 Alkaloid PYKS low borderline
LalaLA_scaffold900372550 Alkaloid PYKS low borderline
LalaLA_scaffold9580381100 Alkaloid PYKS low borderline