PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
KN538764.1_FGP009 oryza_longistaminata KN538764.1_FGP009
KN538764.1_FGP010 oryza_longistaminata KN538764.1_FGP010
KN538921.1_FGP015 oryza_longistaminata KN538921.1_FGP015
KN539221.1_FGP006 oryza_longistaminata KN539221.1_FGP006
KN539221.1_FGP010 oryza_longistaminata KN539221.1_FGP010
KN539621.1_FGP002 oryza_longistaminata KN539621.1_FGP002
OMERI02G24220.1 oryza_meridionalis OMERI02G24220.1
OMERI02G24230.1 oryza_meridionalis OMERI02G24230.1
OMERI02G24240.1 oryza_meridionalis OMERI02G24240.1
OMERI02G24250.1 oryza_meridionalis OMERI02G24250.1
OMERI04G15700.1 oryza_meridionalis OMERI04G15700.1
OMERI04G15720.1 oryza_meridionalis OMERI04G15720.1
OMERI05G03510.1 oryza_meridionalis OMERI05G03510.1
OMERI05G03510.2 oryza_meridionalis OMERI05G03510.2
OMERI05G15010.1 oryza_meridionalis OMERI05G15010.1
OMERI07G12970.1 oryza_meridionalis OMERI07G12970.1
OMERI12G09850.1 oryza_meridionalis OMERI12G09850.1
ONIVA01G06780.1 oryza_nivara ONIVA01G06780.1
ONIVA02G27060.1 oryza_nivara ONIVA02G27060.1
ONIVA02G27090.1 oryza_nivara ONIVA02G27090.1
ONIVA02G27090.2 oryza_nivara ONIVA02G27090.2
ONIVA02G27090.3 oryza_nivara ONIVA02G27090.3
ONIVA02G27120.1 oryza_nivara ONIVA02G27120.1
ONIVA04G17220.1 oryza_nivara ONIVA04G17220.1
ONIVA05G03470.2 oryza_nivara ONIVA05G03470.2
ONIVA05G18200.1 oryza_nivara ONIVA05G18200.1
ONIVA06G31320.1 oryza_nivara ONIVA06G31320.1
ONIVA09G08040.1 oryza_nivara ONIVA09G08040.1
OoffiChr02g02190.1 oryza_officinalis OoffiChr02g02190.1
OoffiChr02g02191.1 oryza_officinalis OoffiChr02g02191.1