PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
BAampscaffold_100030300 barbula_amplexifolia BAampscaffold_100030300
BAampscaffold_130072330 barbula_amplexifolia BAampscaffold_130072330
BAampscaffold_20115090 barbula_amplexifolia BAampscaffold_20115090
BAampscaffold_20118280 barbula_amplexifolia BAampscaffold_20118280
BAampscaffold_20118320 barbula_amplexifolia BAampscaffold_20118320
BAampscaffold_40140830 barbula_amplexifolia BAampscaffold_40140830
BAampscaffold_40145860 barbula_amplexifolia BAampscaffold_40145860
BAampscaffold_40145870 barbula_amplexifolia BAampscaffold_40145870
BAampscaffold_40145890 barbula_amplexifolia BAampscaffold_40145890
BAampscaffold_60191010 barbula_amplexifolia BAampscaffold_60191010
BAampscaffold_70218670 barbula_amplexifolia BAampscaffold_70218670
BAampscaffold_90243510 barbula_amplexifolia BAampscaffold_90243510
BAampscaffold_90243520 barbula_amplexifolia BAampscaffold_90243520
BAampscaffold_90243530 barbula_amplexifolia BAampscaffold_90243530
BAampscaffold_90243560 barbula_amplexifolia BAampscaffold_90243560
BAampscaffold_90243580 barbula_amplexifolia BAampscaffold_90243580
Bith100014580 bartramia_ithyphylla Bith100014580
Bith1760072010 bartramia_ithyphylla Bith1760072010
Bith2910168600 bartramia_ithyphylla Bith2910168600
Bith320176850 bartramia_ithyphylla Bith320176850
Bith3470187990 bartramia_ithyphylla Bith3470187990
Bith50197570 bartramia_ithyphylla Bith50197570
Bith580203710 bartramia_ithyphylla Bith580203710
Bith580203730 bartramia_ithyphylla Bith580203730
Bith921610259150 bartramia_ithyphylla Bith921610259150
Bith990264920 bartramia_ithyphylla Bith990264920
bauhinia_variegata_KAI4300286.1 bauhinia_variegata bauhinia_variegata_KAI4300286.1
bauhinia_variegata_KAI4305570.1 bauhinia_variegata bauhinia_variegata_KAI4305570.1
bauhinia_variegata_KAI4334376.1 bauhinia_variegata bauhinia_variegata_KAI4334376.1
bauhinia_variegata_KAI4334377.1 bauhinia_variegata bauhinia_variegata_KAI4334377.1