Aethionema arabicum (aethionema_arabicum)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 33.17% Phenylpropanoid pathway 20.65% Alkaloid pathway 20.14% Flavonoid pathway 11.22% Rosmarinic acid pathway 7.77% Steroid pathway 7.05%

Family Distribution

3436 Family-Level Calls

BAHD 8.59% C4H 5.97% C3'H/CYP98A 5.73% POD 3.93% CYP76 3.93% 4CL 3.67% UGT 3.2% IFS 3.17%

Other Families 61.82%

More Families (94)

7DLGT 105 3.06% UFGT 105 3.06% NMT 96 2.79% T3O 94 2.74% DWF4/CYP90B1 85 2.47% SMT1/SMT2/SMT3 78 2.27% SGD 72 2.1% F3'H/CYP75B 72 2.1% BR6OX2/CYP85A2 69 2.01% F3H 64 1.86% STR 57 1.66% COMT 49 1.43% TPS 46 1.34% CODM/T6ODM 45 1.31% SLS 43 1.25% CYP71 42 1.22% HCT 40 1.16% CAD 38 1.11% CSE 38 1.11% TAT 36 1.05% TRI/TRII 35 1.02% PYKS 34 0.99% GES 33 0.96% CAS 33 0.96% IFR 32 0.93% T16H 30 0.87% F3'5'H/CYP75A 30 0.87% CYP90D1 29 0.84% H6H 28 0.81% 16OMT 26 0.76% IO 25 0.73% F5H/CYP84A 25 0.73% RAS 25 0.73% FNS 22 0.64% GS 21 0.61% LAC 21 0.61% G8O/G8H 18 0.52% BBE 17 0.49% PMT 17 0.49% 8HGO 17 0.49% ANR 17 0.49% BR6OX1/CYP85A1 17 0.49% CCR 16 0.47% LAMT 15 0.44% CPD/CYP90A1 14 0.41% FPPS 14 0.41% SMO1/SMO2 13 0.38% GGPPS 13 0.38% COR 12 0.35% CYP80B1 10 0.29% CYP719 9 0.26% ANS/LDOX 9 0.26% 7DLH 8 0.23% CPR 8 0.23% SQE 8 0.23% CNMT 7 0.2% MPO 7 0.2% DFR 7 0.2% SQS/FDFT1 7 0.2% CYP51G1 7 0.2% AACT 7 0.2% NCS 6 0.17% PAL 6 0.17% CCoAOMT 6 0.17% ROT3/CYP90C1 6 0.17% MVD 6 0.17% CHS 5 0.15% HPPR 5 0.15% DET2 5 0.15% MVK 5 0.15% TYDC_DDC 4 0.12% XMT_MXMT_DXMT 4 0.12% DWF5 4 0.12% DWF7 4 0.12% CMK/IspE 4 0.12% DXR 3 0.09% IDI 3 0.09% DXS 3 0.09% ISY 2 0.06% CYP80F1 2 0.06% TDC 2 0.06% ADC 2 0.06% CHI 2 0.06% HYD1 2 0.06% HDR/IspH 2 0.06% HDS/IspG 2 0.06% HMGR 2 0.06% PMK 2 0.06% MDS/IspF 2 0.06% MCT/IspD 2 0.06% DWF1 1 0.03% FK 1 0.03% CPI1 1 0.03% HMGS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	461	19	BAHD (231)	View species results
Phenylpropanoid pathway	287	11	POD (118)	View species results
Alkaloid pathway	280	19	SGD (59)	View species results
Flavonoid pathway	156	8	UFGT (101)	View species results
Rosmarinic acid pathway	108	7	C4H (33)	View species results
Steroid pathway	98	10	SMT1/SMT2/SMT3 (46)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	1281	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	360	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
AaraAA_scaffold27910151610	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold33370169470	Alkaloid	SLS	medium	borderline	SLS__00002__sp_U5NDT8_SLS2_CATRO
AaraAA_scaffold34830177360	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177370	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177380	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177390	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177400	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177410	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177420	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177430	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177440	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177450	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34830177460	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold34870178930	Alkaloid	SLS	medium	borderline	SLS__00002__sp_U5NDT8_SLS2_CATRO
AaraAA_scaffold44020223970	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold48450242170	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold48450242180	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold490244260	Alkaloid	SLS	medium	borderline	SLS__00002__sp_U5NDT8_SLS2_CATRO
AaraAA_scaffold53530271380	Alkaloid	SLS	medium	borderline	SLS__00002__sp_U5NDT8_SLS2_CATRO
AaraAA_scaffold55620283440	Alkaloid	SLS	medium	borderline	SLS__00002__sp_U5NDT8_SLS2_CATRO
AaraAA_scaffold56550291930	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold57250298270	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold57250298280	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold5780302200	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold5780302210	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_scaffold5780302220	Alkaloid	SLS	medium	borderline	SLS__00002__sp_U5NDT8_SLS2_CATRO
AaraAA_scaffold8340365420	Alkaloid	SLS	medium	borderline	SLS__00001__sp_Q05047_SLS1_CATRO
AaraAA_C1714730039840	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_C1835590047670	Alkaloid	STR	medium	pass	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_C1837710047810	Alkaloid	STR	low	borderline	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_C1874390050330	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold10680057470	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold10680058220	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_scaffold10780060360	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold11610065000	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold14280077220	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_scaffold14280077230	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_scaffold17480095980	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold17480095990	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold17540096800	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold22500120040	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold24010130430	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_scaffold25130137010	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold25810141660	Alkaloid	STR	low	borderline	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_scaffold25810141670	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
AaraAA_scaffold25810141820	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold33370169590	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold34870178770	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold34870179980	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
AaraAA_scaffold34870179990	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR