Aethionema arabicum (aethionema_arabicum)
Imported from atlas release summary for Aethionema arabicum.
1722
Candidate Protein Records
1390
Pathway-Level Records
3436
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3436
Family-Level Calls
BAHD
8.59%
C4H
5.97%
C3'H/CYP98A
5.73%
POD
3.93%
CYP76
3.93%
4CL
3.67%
UGT
3.2%
IFS
3.17%
Other Families
61.82%
More Families (94)
7DLGT
105
3.06%
UFGT
105
3.06%
NMT
96
2.79%
T3O
94
2.74%
DWF4/CYP90B1
85
2.47%
SMT1/SMT2/SMT3
78
2.27%
SGD
72
2.1%
F3'H/CYP75B
72
2.1%
BR6OX2/CYP85A2
69
2.01%
F3H
64
1.86%
STR
57
1.66%
COMT
49
1.43%
TPS
46
1.34%
CODM/T6ODM
45
1.31%
SLS
43
1.25%
CYP71
42
1.22%
HCT
40
1.16%
CAD
38
1.11%
CSE
38
1.11%
TAT
36
1.05%
TRI/TRII
35
1.02%
PYKS
34
0.99%
GES
33
0.96%
CAS
33
0.96%
IFR
32
0.93%
T16H
30
0.87%
F3'5'H/CYP75A
30
0.87%
CYP90D1
29
0.84%
H6H
28
0.81%
16OMT
26
0.76%
IO
25
0.73%
F5H/CYP84A
25
0.73%
RAS
25
0.73%
FNS
22
0.64%
GS
21
0.61%
LAC
21
0.61%
G8O/G8H
18
0.52%
BBE
17
0.49%
PMT
17
0.49%
8HGO
17
0.49%
ANR
17
0.49%
BR6OX1/CYP85A1
17
0.49%
CCR
16
0.47%
LAMT
15
0.44%
CPD/CYP90A1
14
0.41%
FPPS
14
0.41%
SMO1/SMO2
13
0.38%
GGPPS
13
0.38%
COR
12
0.35%
CYP80B1
10
0.29%
CYP719
9
0.26%
ANS/LDOX
9
0.26%
7DLH
8
0.23%
CPR
8
0.23%
SQE
8
0.23%
CNMT
7
0.2%
MPO
7
0.2%
DFR
7
0.2%
SQS/FDFT1
7
0.2%
CYP51G1
7
0.2%
AACT
7
0.2%
NCS
6
0.17%
PAL
6
0.17%
CCoAOMT
6
0.17%
ROT3/CYP90C1
6
0.17%
MVD
6
0.17%
CHS
5
0.15%
HPPR
5
0.15%
DET2
5
0.15%
MVK
5
0.15%
TYDC_DDC
4
0.12%
XMT_MXMT_DXMT
4
0.12%
DWF5
4
0.12%
DWF7
4
0.12%
CMK/IspE
4
0.12%
DXR
3
0.09%
IDI
3
0.09%
DXS
3
0.09%
ISY
2
0.06%
CYP80F1
2
0.06%
TDC
2
0.06%
ADC
2
0.06%
CHI
2
0.06%
HYD1
2
0.06%
HDR/IspH
2
0.06%
HDS/IspG
2
0.06%
HMGR
2
0.06%
PMK
2
0.06%
MDS/IspF
2
0.06%
MCT/IspD
2
0.06%
DWF1
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 461 | 19 | BAHD (231) | View species results |
| Phenylpropanoid pathway | 287 | 11 | POD (118) | View species results |
| Alkaloid pathway | 280 | 19 | SGD (59) | View species results |
| Flavonoid pathway | 156 | 8 | UFGT (101) | View species results |
| Rosmarinic acid pathway | 108 | 7 | C4H (33) | View species results |
| Steroid pathway | 98 | 10 | SMT1/SMT2/SMT3 (46) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1281 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 360 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| AaraAA_scaffold35930185560 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold35930186980 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold37120192820 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold38150197430 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold40000205390 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold40320207070 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold40340207210 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold42580215850 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold42580215860 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold42580215870 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold42580215880 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold42580215890 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold42580215900 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold42920217860 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold42920218060 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold43560221290 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold44070225120 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold44120225790 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold47130238050 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold50320252630 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold51400260120 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold51400260200 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold51710261790 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold51710261880 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold52050263470 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold52050263820 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold54010274330 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold55190278950 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold56540291250 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold61090322560 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold68430355930 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold7890362620 | Alkaloid | STR | low | borderline |
| AaraAA_scaffold7890362630 | Alkaloid | STR | medium | pass |
| AaraAA_scaffold7890362700 | Alkaloid | STR | medium | pass |
| AaraAA_C1739850041410 | Alkaloid | T16H | medium | borderline |
| AaraAA_C1760430042940 | Alkaloid | T16H | medium | borderline |
| AaraAA_C1787130044540 | Alkaloid | T16H | medium | borderline |
| AaraAA_C1846730048370 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold1220070420 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold25370140690 | Alkaloid | T16H | low | borderline |
| AaraAA_scaffold28580154220 | Alkaloid | T16H | low | borderline |
| AaraAA_scaffold31770163530 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold32260166060 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold32260166070 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold36720191020 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold37600193970 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold41300210870 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold41850214440 | Alkaloid | T16H | low | borderline |
| AaraAA_scaffold43560221810 | Alkaloid | T16H | medium | borderline |
| AaraAA_scaffold44070225270 | Alkaloid | T16H | medium | borderline |