PlantSME Plant secondary metabolism enzyme database

Aethionema arabicum (aethionema_arabicum)

Imported from atlas release summary for Aethionema arabicum.

1390
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (231) View species results
Phenylpropanoid pathway 287 11 POD (118) View species results
Alkaloid pathway 280 19 SGD (59) View species results
Flavonoid pathway 156 8 UFGT (101) View species results
Rosmarinic acid pathway 108 7 C4H (33) View species results
Steroid pathway 98 10 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1281 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 360 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
AaraAA_scaffold61120322750 Alkaloid GES low borderline
AaraAA_scaffold61780326040 Alkaloid GES low borderline
AaraAA_scaffold62470329770 Alkaloid GES medium pass
AaraAA_scaffold62470329780 Alkaloid GES medium pass
AaraAA_scaffold62470329820 Alkaloid GES medium pass
AaraAA_scaffold62470329830 Alkaloid GES medium pass
AaraAA_scaffold62470329840 Alkaloid GES medium pass
AaraAA_scaffold64090336240 Alkaloid GES medium pass
AaraAA_scaffold64820341390 Alkaloid GES low borderline
AaraAA_scaffold64940342830 Alkaloid GES medium pass
AaraAA_scaffold66490348230 Alkaloid GES low borderline
AaraAA_C1518050026350 Alkaloid GS low borderline
AaraAA_C1700930038930 Alkaloid GS high pass
AaraAA_C1750130042200 Alkaloid GS low borderline
AaraAA_C1876290050360 Alkaloid GS medium pass
AaraAA_scaffold12180069520 Alkaloid GS high pass
AaraAA_scaffold14410079400 Alkaloid GS low borderline
AaraAA_scaffold18170099370 Alkaloid GS low borderline
AaraAA_scaffold19820110670 Alkaloid GS high pass
AaraAA_scaffold22520120260 Alkaloid GS low borderline
AaraAA_scaffold2290122510 Alkaloid GS low borderline
AaraAA_scaffold32260165240 Alkaloid GS low borderline
AaraAA_scaffold34830178160 Alkaloid GS medium pass
AaraAA_scaffold34830178170 Alkaloid GS medium pass
AaraAA_scaffold34830178180 Alkaloid GS high pass
AaraAA_scaffold36590190060 Alkaloid GS high pass
AaraAA_scaffold38040195200 Alkaloid GS high pass
AaraAA_scaffold45380231820 Alkaloid GS low borderline
AaraAA_scaffold47510240370 Alkaloid GS low borderline
AaraAA_scaffold53460270580 Alkaloid GS low borderline
AaraAA_scaffold56580292690 Alkaloid GS high pass
AaraAA_scaffold60660319950 Alkaloid GS medium pass
AaraAA_C1783310044300 Alkaloid H6H medium borderline
AaraAA_scaffold11730066140 Alkaloid H6H low borderline
AaraAA_scaffold14530080630 Alkaloid H6H medium borderline
AaraAA_scaffold14530080640 Alkaloid H6H medium borderline
AaraAA_scaffold17480096710 Alkaloid H6H low borderline
AaraAA_scaffold18430101540 Alkaloid H6H medium borderline
AaraAA_scaffold19600109750 Alkaloid H6H medium borderline
AaraAA_scaffold23150125520 Alkaloid H6H low borderline
AaraAA_scaffold25060135360 Alkaloid H6H medium borderline
AaraAA_scaffold42920218080 Alkaloid H6H low borderline
AaraAA_scaffold42960219230 Alkaloid H6H low borderline
AaraAA_scaffold43560221390 Alkaloid H6H high pass
AaraAA_scaffold49650249190 Alkaloid H6H medium borderline
AaraAA_scaffold50970259170 Alkaloid H6H medium borderline
AaraAA_scaffold51710262210 Alkaloid H6H low borderline
AaraAA_scaffold51710262220 Alkaloid H6H low borderline
AaraAA_scaffold51710262230 Alkaloid H6H low borderline
AaraAA_scaffold55300281010 Alkaloid H6H low borderline