PlantSME Plant secondary metabolism enzyme database

Aethionema arabicum (aethionema_arabicum)

Imported from atlas release summary for Aethionema arabicum.

1390
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (231) View species results
Phenylpropanoid pathway 287 11 POD (118) View species results
Alkaloid pathway 280 19 SGD (59) View species results
Flavonoid pathway 156 8 UFGT (101) View species results
Rosmarinic acid pathway 108 7 C4H (33) View species results
Steroid pathway 98 10 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1281 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 360 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
AaraAA_scaffold56420288530 Alkaloid H6H medium borderline
AaraAA_scaffold56420289550 Alkaloid H6H low borderline
AaraAA_scaffold58040303920 Alkaloid H6H low borderline
AaraAA_scaffold60660319890 Alkaloid H6H medium borderline
AaraAA_scaffold60660319900 Alkaloid H6H medium borderline
AaraAA_scaffold60660319920 Alkaloid H6H medium borderline
AaraAA_scaffold7600361230 Alkaloid H6H medium borderline
AaraAA_scaffold8420366010 Alkaloid H6H low borderline
AaraAA_scaffold8920369150 Alkaloid H6H low borderline
AaraAA_scaffold9050370000 Alkaloid H6H low borderline
AaraAA_C1260970007540 Alkaloid IO medium borderline
AaraAA_C1650010035670 Alkaloid IO medium borderline
AaraAA_C1760430042950 Alkaloid IO medium borderline
AaraAA_scaffold10610056420 Alkaloid IO medium borderline
AaraAA_scaffold10610056450 Alkaloid IO medium borderline
AaraAA_scaffold10610056460 Alkaloid IO medium borderline
AaraAA_scaffold17600097720 Alkaloid IO medium borderline
AaraAA_scaffold25370140700 Alkaloid IO medium borderline
AaraAA_scaffold27910151390 Alkaloid IO medium borderline
AaraAA_scaffold31770163540 Alkaloid IO medium borderline
AaraAA_scaffold33980172760 Alkaloid IO low borderline
AaraAA_scaffold34770177190 Alkaloid IO medium borderline
AaraAA_scaffold34830177840 Alkaloid IO medium pass
AaraAA_scaffold34870179500 Alkaloid IO medium borderline
AaraAA_scaffold35500184040 Alkaloid IO medium borderline
AaraAA_scaffold38040194770 Alkaloid IO medium borderline
AaraAA_scaffold39920204510 Alkaloid IO medium borderline
AaraAA_scaffold41300210810 Alkaloid IO medium pass
AaraAA_scaffold44290227150 Alkaloid IO medium borderline
AaraAA_scaffold45750233200 Alkaloid IO medium borderline
AaraAA_scaffold48450242110 Alkaloid IO medium borderline
AaraAA_scaffold490244150 Alkaloid IO medium borderline
AaraAA_scaffold55900285080 Alkaloid IO medium borderline
AaraAA_scaffold55900285270 Alkaloid IO low borderline
AaraAA_scaffold7130358720 Alkaloid IO medium borderline
AaraAA_C1790050044680 Alkaloid ISY medium pass
AaraAA_scaffold10400055230 Alkaloid ISY medium pass
AaraAA_scaffold23550127290 Alkaloid LAMT medium borderline
AaraAA_scaffold24010131070 Alkaloid LAMT medium borderline
AaraAA_scaffold28560153310 Alkaloid LAMT medium borderline
AaraAA_scaffold43980223310 Alkaloid LAMT medium borderline
AaraAA_scaffold46130234450 Alkaloid LAMT medium borderline
AaraAA_scaffold55620283700 Alkaloid LAMT medium borderline
AaraAA_scaffold5650290660 Alkaloid LAMT medium borderline
AaraAA_scaffold5650290670 Alkaloid LAMT low borderline
AaraAA_scaffold5650290680 Alkaloid LAMT medium borderline
AaraAA_scaffold5650290700 Alkaloid LAMT medium borderline
AaraAA_scaffold5650290710 Alkaloid LAMT medium borderline
AaraAA_scaffold58120305100 Alkaloid LAMT medium pass
AaraAA_scaffold60590318330 Alkaloid LAMT low borderline