PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Aalp01G0015860 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017050 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017100 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017120 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017130 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017180 Steroid DWF4/CYP90B1 low borderline
Aalp01G0039750 Steroid DWF4/CYP90B1 low borderline
Aalp02G0001350 Steroid DWF4/CYP90B1 low borderline
Aalp02G0002200 Steroid DWF4/CYP90B1 medium borderline
Aalp02G0005120 Steroid DWF4/CYP90B1 low borderline
Aalp02G0011840 Steroid DWF4/CYP90B1 low borderline
Aalp02G0022810 Steroid DWF4/CYP90B1 medium borderline
Aalp03G0016610 Steroid DWF4/CYP90B1 low borderline
Aalp03G0016620 Steroid DWF4/CYP90B1 low borderline
Aalp03G0016680 Steroid DWF4/CYP90B1 medium borderline
Aalp03G0016690 Steroid DWF4/CYP90B1 low borderline
Aalp03G0024840 Steroid DWF4/CYP90B1 low borderline
Aalp04G0005770 Steroid DWF4/CYP90B1 low borderline
Aalp04G0006750 Steroid DWF4/CYP90B1 low borderline
Aalp04G0010530 Steroid DWF4/CYP90B1 medium borderline
Aalp04G0011910 Steroid DWF4/CYP90B1 medium borderline
Aalp04G0012180 Steroid DWF4/CYP90B1 low borderline
Aalp04G0012190 Steroid DWF4/CYP90B1 low borderline
Aalp04G0012200 Steroid DWF4/CYP90B1 low borderline
Aalp04G0012750 Steroid DWF4/CYP90B1 low borderline
Aalp04G0017650 Steroid DWF4/CYP90B1 low borderline
Aalp04G0027210 Steroid DWF4/CYP90B1 low borderline
Aalp04G0029500 Steroid DWF4/CYP90B1 low borderline
Aalp04G0036990 Steroid DWF4/CYP90B1 low borderline
Aalp04G0043690 Steroid DWF4/CYP90B1 low borderline
Aalp04G0043700 Steroid DWF4/CYP90B1 low borderline
Aalp04G0043710 Steroid DWF4/CYP90B1 low borderline
Aalp04G0043740 Steroid DWF4/CYP90B1 medium borderline
Aalp04G0043760 Steroid DWF4/CYP90B1 medium borderline
Aalp04G0043790 Steroid DWF4/CYP90B1 medium borderline
Aalp04G0043800 Steroid DWF4/CYP90B1 medium borderline
Aalp04G0045280 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003840 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003850 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003870 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003880 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003890 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003900 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003910 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003920 Steroid DWF4/CYP90B1 low borderline
Aalp05G0003930 Steroid DWF4/CYP90B1 low borderline
Aalp05G0006600 Steroid DWF4/CYP90B1 low borderline
Aalp05G0007380 Steroid DWF4/CYP90B1 medium borderline
Aalp05G0025470 Steroid DWF4/CYP90B1 low borderline
Aalp06G0010190 Steroid DWF4/CYP90B1 low borderline