PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Aalp01G0001800 Flavonoid F3H low borderline
Aalp01G0004330 Flavonoid F3H medium borderline
Aalp01G0004340 Flavonoid F3H medium borderline
Aalp01G0004350 Flavonoid F3H medium borderline
Aalp01G0004360 Flavonoid F3H medium borderline
Aalp01G0004370 Flavonoid F3H medium borderline
Aalp01G0005200 Flavonoid F3H medium borderline
Aalp01G0007080 Flavonoid F3H medium borderline
Aalp01G0007090 Flavonoid F3H medium borderline
Aalp01G0007100 Flavonoid F3H medium borderline
Aalp01G0007110 Flavonoid F3H medium borderline
Aalp01G0007120 Flavonoid F3H medium borderline
Aalp01G0007130 Flavonoid F3H medium borderline
Aalp01G0015270 Flavonoid F3H medium borderline
Aalp01G0018470 Flavonoid F3H low borderline
Aalp01G0018480 Flavonoid F3H low borderline
Aalp01G0018500 Flavonoid F3H low borderline
Aalp01G0018550 Flavonoid F3H low borderline
Aalp01G0020660 Flavonoid F3H medium borderline
Aalp01G0034530 Flavonoid F3H medium borderline
Aalp01G0041340 Flavonoid F3H low borderline
Aalp01G0041360 Flavonoid F3H medium pass
Aalp01G0041370 Flavonoid F3H low borderline
Aalp01G0041890 Flavonoid F3H medium borderline
Aalp02G0003040 Flavonoid F3H medium borderline
Aalp02G0003500 Flavonoid F3H medium borderline
Aalp02G0026740 Flavonoid F3H medium borderline
Aalp02G0027800 Flavonoid F3H medium borderline
Aalp02G0029040 Flavonoid F3H medium borderline
Aalp02G0030100 Flavonoid F3H medium borderline
Aalp02G0030110 Flavonoid F3H low borderline
Aalp03G0012110 Flavonoid F3H medium borderline
Aalp03G0014070 Flavonoid F3H medium borderline
Aalp03G0014990 Flavonoid F3H medium borderline
Aalp03G0017860 Flavonoid F3H low borderline
Aalp03G0017880 Flavonoid F3H low borderline
Aalp03G0022360 Flavonoid F3H medium borderline
Aalp03G0022380 Flavonoid F3H medium borderline
Aalp03G0022390 Flavonoid F3H medium borderline
Aalp03G0030230 Flavonoid F3H medium borderline
Aalp03G0038320 Flavonoid F3H medium borderline
Aalp04G0004510 Flavonoid F3H low borderline
Aalp04G0004770 Flavonoid F3H low borderline
Aalp04G0026050 Flavonoid F3H medium borderline
Aalp04G0026060 Flavonoid F3H medium pass
Aalp04G0026080 Flavonoid F3H medium borderline
Aalp04G0029190 Flavonoid F3H low borderline
Aalp04G0031430 Flavonoid F3H medium borderline
Aalp04G0034130 Flavonoid F3H medium borderline
Aalp04G0039200 Flavonoid F3H medium borderline