PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Aalp05G0003880 Alkaloid T3O medium borderline
Aalp05G0003900 Alkaloid T3O medium borderline
Aalp05G0004710 Alkaloid T3O medium borderline
Aalp05G0007380 Alkaloid T3O medium pass
Aalp05G0010320 Alkaloid T3O low borderline
Aalp05G0010760 Alkaloid T3O medium borderline
Aalp05G0020290 Alkaloid T3O medium borderline
Aalp05G0020320 Alkaloid T3O medium borderline
Aalp05G0020330 Alkaloid T3O medium borderline
Aalp05G0025470 Alkaloid T3O low borderline
Aalp05G0031660 Alkaloid T3O medium borderline
Aalp06G0006540 Alkaloid T3O medium pass
Aalp06G0010140 Alkaloid T3O medium borderline
Aalp06G0010190 Alkaloid T3O medium borderline
Aalp06G0010200 Alkaloid T3O medium borderline
Aalp06G0010210 Alkaloid T3O medium borderline
Aalp07G0001380 Alkaloid T3O medium pass
Aalp07G0003040 Alkaloid T3O medium borderline
Aalp07G0003050 Alkaloid T3O medium borderline
Aalp07G0003080 Alkaloid T3O medium borderline
Aalp07G0003120 Alkaloid T3O medium borderline
Aalp07G0003130 Alkaloid T3O medium borderline
Aalp07G0003140 Alkaloid T3O medium borderline
Aalp07G0003150 Alkaloid T3O medium borderline
Aalp07G0004270 Alkaloid T3O medium pass
Aalp07G0004380 Alkaloid T3O medium borderline
Aalp07G0011110 Alkaloid T3O medium borderline
Aalp07G0011120 Alkaloid T3O medium borderline
Aalp07G0012240 Alkaloid T3O medium borderline
Aalp07G0028160 Alkaloid T3O medium borderline
Aalp07G0031850 Alkaloid T3O medium pass
Aalp07G0036250 Alkaloid T3O medium pass
Aalp07G0037270 Alkaloid T3O medium borderline
Aalp07G0038700 Alkaloid T3O medium pass
Aalp08G0002630 Alkaloid T3O medium borderline
Aalp08G0004410 Alkaloid T3O medium borderline
Aalp08G0005410 Alkaloid T3O medium pass
Aalp08G0006040 Alkaloid T3O medium pass
Aalp08G0009070 Alkaloid T3O medium borderline
Aalp08G0009390 Alkaloid T3O low borderline
Aalp08G0011050 Alkaloid T3O medium borderline
Aalp08G0012820 Alkaloid T3O medium borderline
Aalp08G0016600 Alkaloid T3O low borderline
Aalp08G0040040 Alkaloid T3O medium borderline
Aalp08G0044580 Alkaloid T3O low borderline
Aalp08G0048710 Alkaloid T3O medium borderline
Aalp08G0048730 Alkaloid T3O medium borderline
Aalp08G0048750 Alkaloid T3O medium borderline
Aalp08G0048760 Alkaloid T3O medium borderline
Aalp08G0050940 Alkaloid T3O medium pass