Arabis alpina (arabis_alpina)
Imported from atlas release summary for Arabis alpina.
1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1406
Candidate Genes
BAHD
6.94%
C3'H/CYP98A
5.94%
C4H
5.91%
CYP76
4.35%
IFS
3.7%
4CL
3.7%
POD
3.67%
UGT
3.5%
Other Families
62.29%
More Families (94)
UFGT
118
3.47%
7DLGT
117
3.44%
T3O
106
3.12%
F3H
98
2.88%
NMT
94
2.76%
DWF4/CYP90B1
84
2.47%
BR6OX2/CYP85A2
74
2.18%
SGD
67
1.97%
F3'H/CYP75B
67
1.97%
SMT1/SMT2/SMT3
64
1.88%
STR
61
1.79%
CODM/T6ODM
58
1.7%
H6H
48
1.41%
CYP71
44
1.29%
CAS
42
1.23%
TRI/TRII
41
1.21%
T16H
39
1.15%
CSE
39
1.15%
CAD
39
1.15%
IFR
36
1.06%
FNS
30
0.88%
RAS
30
0.88%
TPS
30
0.88%
SLS
29
0.85%
GES
28
0.82%
G8O/G8H
27
0.79%
PYKS
26
0.76%
F5H/CYP84A
26
0.76%
TAT
26
0.76%
CPD/CYP90A1
23
0.68%
BBE
22
0.65%
GS
22
0.65%
LAC
21
0.62%
COMT
21
0.62%
ANR
20
0.59%
LAMT
19
0.56%
HCT
19
0.56%
CCR
18
0.53%
IO
17
0.5%
CYP90D1
17
0.5%
8HGO
15
0.44%
GGPPS
15
0.44%
16OMT
14
0.41%
7DLH
14
0.41%
F3'5'H/CYP75A
13
0.38%
PAL
12
0.35%
CPR
11
0.32%
SMO1/SMO2
11
0.32%
CYP51G1
11
0.32%
BR6OX1/CYP85A1
11
0.32%
CNMT
10
0.29%
DFR
10
0.29%
ANS/LDOX
10
0.29%
PMT
9
0.26%
FPPS
9
0.26%
NCS
8
0.24%
MPO
8
0.24%
CYP719
7
0.21%
COR
7
0.21%
ROT3/CYP90C1
7
0.21%
AACT
7
0.21%
CCoAOMT
6
0.18%
SQE
6
0.18%
MVK
6
0.18%
CHS
5
0.15%
HPPR
5
0.15%
SQS/FDFT1
5
0.15%
MVD
5
0.15%
TDC
4
0.12%
CYP80B1
4
0.12%
DWF7
4
0.12%
CYP80F1
3
0.09%
TYDC_DDC
3
0.09%
CHI
3
0.09%
DET2
3
0.09%
MCT/IspD
3
0.09%
IDI
3
0.09%
DXS
3
0.09%
ADC
2
0.06%
ISY
2
0.06%
HYD1
2
0.06%
DWF1
2
0.06%
PMK
2
0.06%
HMGR
2
0.06%
XMT_MXMT_DXMT
1
0.03%
DWF5
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
MDS/IspF
1
0.03%
CMK/IspE
1
0.03%
HMGS
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 426 | 19 | BAHD (197) | View species results |
| Alkaloid pathway | 322 | 18 | SGD (62) | View species results |
| Phenylpropanoid pathway | 264 | 11 | POD (121) | View species results |
| Flavonoid pathway | 175 | 9 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 113 | 7 | C4H (48) | View species results |
| Steroid pathway | 106 | 13 | SMT1/SMT2/SMT3 (44) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1300 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 285 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aalp04G0011760 | Terpenoid | UGT | medium | pass | UGT__00070__sp_Q5XF20_U84A1_ARATH |
| Aalp04G0011930 | Terpenoid | UGT | medium | pass | UGT__00051__sp_O23382_U71B5_ARATH |
| Aalp04G0011940 | Terpenoid | UGT | medium | pass | UGT__00051__sp_O23382_U71B5_ARATH |
| Aalp04G0014410 | Terpenoid | UGT | medium | pass | UGT__00069__sp_Q0WW21_U75C1_ARATH |
| Aalp04G0021990 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aalp04G0023610 | Terpenoid | UGT | low | borderline | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Aalp04G0023640 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aalp04G0023650 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aalp04G0024260 | Terpenoid | UGT | medium | pass | UGT__00060__sp_O82383_U71D1_ARATH |
| Aalp04G0027570 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| Aalp04G0031540 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| Aalp04G0031560 | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| Aalp04G0031570 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Aalp04G0031580 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Aalp04G0031590 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Aalp04G0032040 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Aalp04G0037350 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Aalp04G0041910 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| Aalp04G0041920 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| Aalp04G0041930 | Terpenoid | UGT | medium | pass | UGT__00049__sp_O22820_U74F1_ARATH |
| Aalp05G0009020 | Terpenoid | UGT | medium | pass | UGT__00099__sp_Q9LTH3_U76E1_ARATH |
| Aalp05G0009030 | Terpenoid | UGT | medium | pass | UGT__00099__sp_Q9LTH3_U76E1_ARATH |
| Aalp05G0009040 | Terpenoid | UGT | medium | pass | UGT__00080__sp_Q94AB5_U7E12_ARATH |
| Aalp05G0009050 | Terpenoid | UGT | medium | pass | UGT__00099__sp_Q9LTH3_U76E1_ARATH |
| Aalp05G0009090 | Terpenoid | UGT | medium | pass | UGT__00099__sp_Q9LTH3_U76E1_ARATH |
| Aalp05G0009100 | Terpenoid | UGT | medium | pass | UGT__00099__sp_Q9LTH3_U76E1_ARATH |
| Aalp05G0016180 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Aalp05G0020040 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Aalp05G0020060 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Aalp05G0022860 | Terpenoid | UGT | low | borderline | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Aalp05G0022870 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Aalp05G0024270 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Aalp05G0024280 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Aalp05G0024300 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Aalp06G0001000 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Aalp06G0007210 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| Aalp06G0007250 | Terpenoid | UGT | medium | pass | UGT__00106__sp_Q9SKC5_U74D1_ARATH |
| Aalp06G0019220 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Aalp06G0024700 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Aalp06G0024950 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| Aalp06G0024960 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| Aalp06G0029650 | Terpenoid | UGT | medium | pass | UGT__00080__sp_Q94AB5_U7E12_ARATH |
| Aalp07G0003800 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Aalp07G0004360 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Aalp07G0007750 | Terpenoid | UGT | medium | pass | UGT__00077__sp_Q8VZE9_U73B1_ARATH |
| Aalp07G0007760 | Terpenoid | UGT | medium | pass | UGT__00077__sp_Q8VZE9_U73B1_ARATH |
| Aalp07G0007770 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Aalp07G0007780 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Aalp07G0007790 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Aalp07G0007800 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |