PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1692
Candidate Protein Records
1406
Pathway-Level Records
3402
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aalp07G0003150 Alkaloid T3O medium borderline
Aalp07G0004270 Alkaloid T3O medium pass
Aalp07G0004380 Alkaloid T3O medium borderline
Aalp07G0011110 Alkaloid T3O medium borderline
Aalp07G0011120 Alkaloid T3O medium borderline
Aalp07G0012240 Alkaloid T3O medium borderline
Aalp07G0028160 Alkaloid T3O medium borderline
Aalp07G0031850 Alkaloid T3O medium pass
Aalp07G0036250 Alkaloid T3O medium pass
Aalp07G0037270 Alkaloid T3O medium borderline
Aalp07G0038700 Alkaloid T3O medium pass
Aalp08G0002630 Alkaloid T3O medium borderline
Aalp08G0004410 Alkaloid T3O medium borderline
Aalp08G0005410 Alkaloid T3O medium pass
Aalp08G0006040 Alkaloid T3O medium pass
Aalp08G0009070 Alkaloid T3O medium borderline
Aalp08G0009390 Alkaloid T3O low borderline
Aalp08G0011050 Alkaloid T3O medium borderline
Aalp08G0012820 Alkaloid T3O medium borderline
Aalp08G0016600 Alkaloid T3O low borderline
Aalp08G0040040 Alkaloid T3O medium borderline
Aalp08G0044580 Alkaloid T3O low borderline
Aalp08G0048710 Alkaloid T3O medium borderline
Aalp08G0048730 Alkaloid T3O medium borderline
Aalp08G0048750 Alkaloid T3O medium borderline
Aalp08G0048760 Alkaloid T3O medium borderline
Aalp08G0050940 Alkaloid T3O medium pass
Aalp08G0054270 Alkaloid T3O low borderline
Aalp08G0057770 Alkaloid T3O medium borderline
Aalp08G0057790 Alkaloid T3O medium borderline
Aalp08G0057810 Alkaloid T3O medium borderline
Aalp08G0057820 Alkaloid T3O medium borderline
Aalpscaffold_1720003200 Alkaloid T3O low borderline
Aalp01G0036120 Alkaloid TDC low borderline
Aalp02G0005800 Alkaloid TDC low borderline
Aalp03G0039200 Alkaloid TDC medium borderline
Aalp07G0023730 Alkaloid TDC low borderline
Aalp01G0008360 Alkaloid TRI/TRII medium pass
Aalp01G0008370 Alkaloid TRI/TRII medium pass
Aalp01G0008380 Alkaloid TRI/TRII medium pass
Aalp01G0032570 Alkaloid TRI/TRII medium pass
Aalp02G0006600 Alkaloid TRI/TRII medium pass
Aalp02G0018280 Alkaloid TRI/TRII medium pass
Aalp02G0022510 Alkaloid TRI/TRII medium pass
Aalp02G0022530 Alkaloid TRI/TRII medium pass
Aalp03G0002890 Alkaloid TRI/TRII low borderline
Aalp03G0005150 Alkaloid TRI/TRII low borderline
Aalp03G0009040 Alkaloid TRI/TRII medium pass
Aalp03G0009050 Alkaloid TRI/TRII medium pass
Aalp03G0013980 Alkaloid TRI/TRII medium pass