PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Aalp05G0001050 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0003800 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0003830 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0004680 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0004710 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0005430 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0020290 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0020320 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0025490 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0031660 Steroid BR6OX2/CYP85A2 low borderline
Aalp05G0032720 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0010140 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0010200 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0010210 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0016790 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0019900 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0024910 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0026280 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0026290 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0026500 Steroid BR6OX2/CYP85A2 low borderline
Aalp06G0032370 Steroid BR6OX2/CYP85A2 low borderline
Aalp07G0001430 Steroid BR6OX2/CYP85A2 low borderline
Aalp07G0003050 Steroid BR6OX2/CYP85A2 low borderline
Aalp07G0006540 Steroid BR6OX2/CYP85A2 low borderline
Aalp07G0019330 Steroid BR6OX2/CYP85A2 low borderline
Aalp07G0028160 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0004410 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0004750 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0011050 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0016850 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0016860 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0016870 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0041900 Steroid BR6OX2/CYP85A2 low borderline
Aalp08G0056210 Steroid BR6OX2/CYP85A2 low borderline
Aalpscaffold_1720003200 Steroid BR6OX2/CYP85A2 low borderline
Aalp01G0041410 Steroid CAS medium pass
Aalp01G0041420 Steroid CAS medium pass
Aalp02G0005520 Steroid CAS low borderline
Aalp02G0005560 Steroid CAS low borderline
Aalp02G0011730 Steroid CAS medium pass
Aalp02G0027870 Steroid CAS medium pass
Aalp02G0029000 Steroid CAS medium pass
Aalp02G0029600 Steroid CAS medium pass
Aalp02G0029610 Steroid CAS medium pass
Aalp02G0029620 Steroid CAS medium pass
Aalp02G0029630 Steroid CAS medium pass
Aalp02G0029640 Steroid CAS medium pass
Aalp02G0029650 Steroid CAS medium pass
Aalp02G0029670 Steroid CAS medium pass
Aalp03G0003230 Steroid CAS medium pass