PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1692
Candidate Protein Records
1406
Pathway-Level Records
3402
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Aalp08G0049020 Phenylpropanoid C3'H/CYP98A low borderline
Aalp08G0049030 Phenylpropanoid C3'H/CYP98A low borderline
Aalp08G0050940 Phenylpropanoid C3'H/CYP98A low borderline
Aalp08G0054270 Phenylpropanoid C3'H/CYP98A low borderline
Aalp08G0057770 Phenylpropanoid C3'H/CYP98A medium borderline
Aalp08G0057780 Phenylpropanoid C3'H/CYP98A medium borderline
Aalp08G0057790 Phenylpropanoid C3'H/CYP98A medium borderline
Aalp08G0057810 Phenylpropanoid C3'H/CYP98A medium borderline
Aalp08G0057820 Phenylpropanoid C3'H/CYP98A medium borderline
Aalpscaffold_1720003200 Phenylpropanoid C3'H/CYP98A low borderline
Aalpscaffold_2550005510 Phenylpropanoid C3'H/CYP98A low borderline
Aalpscaffold_3020006400 Phenylpropanoid C3'H/CYP98A low borderline
Aalpscaffold_930012300 Phenylpropanoid C3'H/CYP98A low borderline
Aalp01G0017080 Phenylpropanoid C4H/CYP73A low borderline
Aalp04G0039570 Phenylpropanoid C4H/CYP73A low borderline
Aalp05G0020310 Phenylpropanoid C4H/CYP73A low borderline
Aalp07G0002000 Phenylpropanoid C4H/CYP73A medium borderline
Aalp01G0011360 Phenylpropanoid CAD medium borderline
Aalp01G0011370 Phenylpropanoid CAD medium borderline
Aalp01G0011380 Phenylpropanoid CAD medium borderline
Aalp01G0011400 Phenylpropanoid CAD medium borderline
Aalp01G0030930 Phenylpropanoid CAD low borderline
Aalp01G0041410 Phenylpropanoid CAD low borderline
Aalp01G0041420 Phenylpropanoid CAD low borderline
Aalp02G0000060 Phenylpropanoid CAD low borderline
Aalp02G0004650 Phenylpropanoid CAD medium borderline
Aalp02G0005520 Phenylpropanoid CAD low borderline
Aalp02G0005560 Phenylpropanoid CAD low borderline
Aalp02G0021590 Phenylpropanoid CAD medium pass
Aalp02G0027580 Phenylpropanoid CAD low borderline
Aalp03G0022910 Phenylpropanoid CAD medium pass
Aalp04G0005870 Phenylpropanoid CAD medium borderline
Aalp04G0014290 Phenylpropanoid CAD low borderline
Aalp04G0016180 Phenylpropanoid CAD low borderline
Aalp04G0016190 Phenylpropanoid CAD medium pass
Aalp05G0003440 Phenylpropanoid CAD low borderline
Aalp06G0003030 Phenylpropanoid CAD low borderline
Aalp06G0004530 Phenylpropanoid CAD low borderline
Aalp06G0008810 Phenylpropanoid CAD medium pass
Aalp06G0020130 Phenylpropanoid CAD medium pass
Aalp06G0026190 Phenylpropanoid CAD low borderline
Aalp06G0026230 Phenylpropanoid CAD low borderline
Aalp06G0026260 Phenylpropanoid CAD low borderline
Aalp07G0001240 Phenylpropanoid CAD medium pass
Aalp07G0002350 Phenylpropanoid CAD medium pass
Aalp07G0002460 Phenylpropanoid CAD medium pass
Aalp07G0002470 Phenylpropanoid CAD medium pass
Aalp07G0002480 Phenylpropanoid CAD medium pass
Aalp07G0007510 Phenylpropanoid CAD medium pass
Aalp07G0020610 Phenylpropanoid CAD medium borderline