PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Aalp08G0031170 Steroid CPI1 high pass
Aalp01G0014690 Steroid CYP51G1 medium borderline
Aalp03G0031860 Steroid CYP51G1 medium borderline
Aalp03G0031870 Steroid CYP51G1 medium borderline
Aalp04G0026000 Steroid CYP51G1 medium borderline
Aalp05G0010760 Steroid CYP51G1 medium borderline
Aalp05G0010770 Steroid CYP51G1 medium borderline
Aalp07G0004380 Steroid CYP51G1 medium borderline
Aalp07G0013300 Steroid CYP51G1 medium borderline
Aalp07G0032830 Steroid CYP51G1 medium borderline
Aalp08G0044580 Steroid CYP51G1 medium pass
Aalpscaffold_3020006400 Steroid CYP51G1 medium borderline
Aalp01G0017090 Steroid CYP90D1 low borderline
Aalp03G0015150 Steroid CYP90D1 medium borderline
Aalp03G0029380 Steroid CYP90D1 low borderline
Aalp03G0031890 Steroid CYP90D1 low borderline
Aalp03G0037800 Steroid CYP90D1 low borderline
Aalp04G0001870 Steroid CYP90D1 medium borderline
Aalp04G0008190 Steroid CYP90D1 low borderline
Aalp04G0011820 Steroid CYP90D1 low borderline
Aalp04G0043770 Steroid CYP90D1 low borderline
Aalp04G0043810 Steroid CYP90D1 low borderline
Aalp04G0045290 Steroid CYP90D1 low borderline
Aalp07G0021790 Steroid CYP90D1 low borderline
Aalp07G0038700 Steroid CYP90D1 medium borderline
Aalp08G0005410 Steroid CYP90D1 medium borderline
Aalp08G0006040 Steroid CYP90D1 medium borderline
Aalp08G0048760 Steroid CYP90D1 low borderline
Aalp08G0049030 Steroid CYP90D1 low borderline
Aalp03G0034430 Steroid DET2 low borderline
Aalp04G0033880 Steroid DET2 medium pass
Aalp05G0023650 Steroid DET2 low borderline
Aalp03G0023320 Steroid DWF1 medium pass
Aalp04G0007080 Steroid DWF1 medium pass
Aalp01G0015860 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017050 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017100 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017120 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017130 Steroid DWF4/CYP90B1 low borderline
Aalp01G0017180 Steroid DWF4/CYP90B1 low borderline
Aalp01G0039750 Steroid DWF4/CYP90B1 low borderline
Aalp02G0001350 Steroid DWF4/CYP90B1 low borderline
Aalp02G0002200 Steroid DWF4/CYP90B1 medium borderline
Aalp02G0005120 Steroid DWF4/CYP90B1 low borderline
Aalp02G0011840 Steroid DWF4/CYP90B1 low borderline
Aalp02G0022810 Steroid DWF4/CYP90B1 medium borderline
Aalp03G0016610 Steroid DWF4/CYP90B1 low borderline
Aalp03G0016620 Steroid DWF4/CYP90B1 low borderline
Aalp03G0016680 Steroid DWF4/CYP90B1 medium borderline
Aalp03G0016690 Steroid DWF4/CYP90B1 low borderline