PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
armoracia_rusticana_Arr23142 Flavonoid F3H medium borderline
armoracia_rusticana_Arr23476 Flavonoid F3H low borderline
armoracia_rusticana_Arr23477 Flavonoid F3H medium borderline
armoracia_rusticana_Arr23745 Flavonoid F3H medium borderline
armoracia_rusticana_Arr25247 Flavonoid F3H medium borderline
armoracia_rusticana_Arr25860 Flavonoid F3H medium borderline
armoracia_rusticana_Arr26095 Flavonoid F3H medium borderline
armoracia_rusticana_Arr26096 Flavonoid F3H low borderline
armoracia_rusticana_Arr26505 Flavonoid F3H medium borderline
armoracia_rusticana_Arr26771 Flavonoid F3H medium borderline
armoracia_rusticana_Arr26788 Flavonoid F3H medium borderline
armoracia_rusticana_Arr26891 Flavonoid F3H medium pass
armoracia_rusticana_Arr26915 Flavonoid F3H medium borderline
armoracia_rusticana_Arr26961 Flavonoid F3H low borderline
armoracia_rusticana_Arr27030 Flavonoid F3H medium borderline
armoracia_rusticana_Arr27135 Flavonoid F3H medium borderline
armoracia_rusticana_Arr2778 Flavonoid F3H medium borderline
armoracia_rusticana_Arr2794 Flavonoid F3H medium borderline
armoracia_rusticana_Arr28510 Flavonoid F3H medium borderline
armoracia_rusticana_Arr2854 Flavonoid F3H medium borderline
armoracia_rusticana_Arr29426 Flavonoid F3H medium borderline
armoracia_rusticana_Arr29624 Flavonoid F3H medium borderline
armoracia_rusticana_Arr29625 Flavonoid F3H medium borderline
armoracia_rusticana_Arr30003 Flavonoid F3H medium pass
armoracia_rusticana_Arr30199 Flavonoid F3H medium borderline
armoracia_rusticana_Arr32182 Flavonoid F3H medium borderline
armoracia_rusticana_Arr32271 Flavonoid F3H medium borderline
armoracia_rusticana_Arr32368 Flavonoid F3H medium pass
armoracia_rusticana_Arr32407 Flavonoid F3H medium borderline
armoracia_rusticana_Arr32545 Flavonoid F3H medium borderline
armoracia_rusticana_Arr32995 Flavonoid F3H low borderline
armoracia_rusticana_Arr33003 Flavonoid F3H medium borderline
armoracia_rusticana_Arr34162 Flavonoid F3H medium borderline
armoracia_rusticana_Arr3449 Flavonoid F3H medium borderline
armoracia_rusticana_Arr34559 Flavonoid F3H medium borderline
armoracia_rusticana_Arr35072 Flavonoid F3H medium borderline
armoracia_rusticana_Arr35239 Flavonoid F3H medium borderline
armoracia_rusticana_Arr35340 Flavonoid F3H low borderline
armoracia_rusticana_Arr35693 Flavonoid F3H medium borderline
armoracia_rusticana_Arr35872 Flavonoid F3H low borderline
armoracia_rusticana_Arr35966 Flavonoid F3H low borderline
armoracia_rusticana_Arr3642 Flavonoid F3H low borderline
armoracia_rusticana_Arr3643 Flavonoid F3H low borderline
armoracia_rusticana_Arr3644 Flavonoid F3H low borderline
armoracia_rusticana_Arr36553 Flavonoid F3H medium borderline
armoracia_rusticana_Arr36631 Flavonoid F3H medium borderline
armoracia_rusticana_Arr36757 Flavonoid F3H medium borderline
armoracia_rusticana_Arr36833 Flavonoid F3H medium borderline
armoracia_rusticana_Arr36954 Flavonoid F3H medium borderline
armoracia_rusticana_Arr37180 Flavonoid F3H low borderline