PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
Reset
Gene Pathway Family Confidence Status Best Target
armoracia_rusticana_Arr38510 Alkaloid NMT medium pass NMT__00022__sp_O65312_MEDEA_ARATH
armoracia_rusticana_Arr38560 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
armoracia_rusticana_Arr38561 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
armoracia_rusticana_Arr38585 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
armoracia_rusticana_Arr38827 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
armoracia_rusticana_Arr39326 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
armoracia_rusticana_Arr39591 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
armoracia_rusticana_Arr39653 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
armoracia_rusticana_Arr39887 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
armoracia_rusticana_Arr39888 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
armoracia_rusticana_Arr40276 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
armoracia_rusticana_Arr40617 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
armoracia_rusticana_Arr40932 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
armoracia_rusticana_Arr40979 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
armoracia_rusticana_Arr41015 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
armoracia_rusticana_Arr41141 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
armoracia_rusticana_Arr4126 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
armoracia_rusticana_Arr41475 Alkaloid NMT medium pass NMT__00057__sp_Q9FR44_PEAM1_ARATH
armoracia_rusticana_Arr41803 Alkaloid NMT low borderline NMT__00032__sp_Q5PP37_ATXR2_ARATH
armoracia_rusticana_Arr41870 Alkaloid NMT medium pass NMT__00023__sp_O82210_ANM12_ARATH
armoracia_rusticana_Arr4258 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
armoracia_rusticana_Arr4260 Alkaloid NMT medium pass NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
armoracia_rusticana_Arr4261 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
armoracia_rusticana_Arr5430 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
armoracia_rusticana_Arr5501 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
armoracia_rusticana_Arr7762 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
armoracia_rusticana_Arr7891 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
armoracia_rusticana_Arr8117 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
armoracia_rusticana_Arr8118 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
armoracia_rusticana_Arr8402 Alkaloid NMT low borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
armoracia_rusticana_Arr8482 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
armoracia_rusticana_Arr8483 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
armoracia_rusticana_Arr8665 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
armoracia_rusticana_Arr8816 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
armoracia_rusticana_Arr9179 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
armoracia_rusticana_Arr9837 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
armoracia_rusticana_Arr9986 Alkaloid NMT low borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL