PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
armoracia_rusticana_Arr10237 Alkaloid T3O low borderline
armoracia_rusticana_Arr10320 Alkaloid T3O medium borderline
armoracia_rusticana_Arr10375 Alkaloid T3O medium pass
armoracia_rusticana_Arr10446 Alkaloid T3O medium borderline
armoracia_rusticana_Arr10468 Alkaloid T3O medium borderline
armoracia_rusticana_Arr10469 Alkaloid T3O medium borderline
armoracia_rusticana_Arr10472 Alkaloid T3O medium borderline
armoracia_rusticana_Arr10722 Alkaloid T3O medium borderline
armoracia_rusticana_Arr11346 Alkaloid T3O low borderline
armoracia_rusticana_Arr11661 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12075 Alkaloid T3O low borderline
armoracia_rusticana_Arr12591 Alkaloid T3O medium pass
armoracia_rusticana_Arr12611 Alkaloid T3O low borderline
armoracia_rusticana_Arr12869 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12870 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12897 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12899 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12956 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12958 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12959 Alkaloid T3O medium borderline
armoracia_rusticana_Arr12960 Alkaloid T3O medium borderline
armoracia_rusticana_Arr13715 Alkaloid T3O low borderline
armoracia_rusticana_Arr14011 Alkaloid T3O medium pass
armoracia_rusticana_Arr14184 Alkaloid T3O medium borderline
armoracia_rusticana_Arr14313 Alkaloid T3O medium borderline
armoracia_rusticana_Arr14696 Alkaloid T3O medium borderline
armoracia_rusticana_Arr14727 Alkaloid T3O medium borderline
armoracia_rusticana_Arr14892 Alkaloid T3O low borderline
armoracia_rusticana_Arr15002 Alkaloid T3O medium borderline
armoracia_rusticana_Arr15864 Alkaloid T3O medium borderline
armoracia_rusticana_Arr15865 Alkaloid T3O medium borderline
armoracia_rusticana_Arr15866 Alkaloid T3O medium borderline
armoracia_rusticana_Arr15867 Alkaloid T3O medium borderline
armoracia_rusticana_Arr15880 Alkaloid T3O medium pass
armoracia_rusticana_Arr16020 Alkaloid T3O medium pass
armoracia_rusticana_Arr16127 Alkaloid T3O medium borderline
armoracia_rusticana_Arr16298 Alkaloid T3O medium borderline
armoracia_rusticana_Arr1685 Alkaloid T3O low borderline
armoracia_rusticana_Arr17365 Alkaloid T3O medium pass
armoracia_rusticana_Arr17481 Alkaloid T3O medium borderline
armoracia_rusticana_Arr17654 Alkaloid T3O medium borderline
armoracia_rusticana_Arr18201 Alkaloid T3O medium pass
armoracia_rusticana_Arr19407 Alkaloid T3O medium pass
armoracia_rusticana_Arr19441 Alkaloid T3O medium borderline
armoracia_rusticana_Arr19513 Alkaloid T3O medium borderline
armoracia_rusticana_Arr19846 Alkaloid T3O medium pass
armoracia_rusticana_Arr20161 Alkaloid T3O low borderline
armoracia_rusticana_Arr20342 Alkaloid T3O medium borderline
armoracia_rusticana_Arr20343 Alkaloid T3O medium pass
armoracia_rusticana_Arr21160 Alkaloid T3O medium pass