PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
armoracia_rusticana_Arr21822 Alkaloid T3O medium pass
armoracia_rusticana_Arr22307 Alkaloid T3O medium pass
armoracia_rusticana_Arr22479 Alkaloid T3O medium borderline
armoracia_rusticana_Arr22480 Alkaloid T3O medium borderline
armoracia_rusticana_Arr22481 Alkaloid T3O medium borderline
armoracia_rusticana_Arr23120 Alkaloid T3O medium pass
armoracia_rusticana_Arr23298 Alkaloid T3O low borderline
armoracia_rusticana_Arr23989 Alkaloid T3O medium borderline
armoracia_rusticana_Arr24016 Alkaloid T3O medium borderline
armoracia_rusticana_Arr24108 Alkaloid T3O low borderline
armoracia_rusticana_Arr25938 Alkaloid T3O medium borderline
armoracia_rusticana_Arr26187 Alkaloid T3O medium pass
armoracia_rusticana_Arr26220 Alkaloid T3O low borderline
armoracia_rusticana_Arr26440 Alkaloid T3O medium borderline
armoracia_rusticana_Arr26449 Alkaloid T3O low borderline
armoracia_rusticana_Arr26583 Alkaloid T3O medium pass
armoracia_rusticana_Arr26745 Alkaloid T3O low borderline
armoracia_rusticana_Arr27588 Alkaloid T3O medium borderline
armoracia_rusticana_Arr27617 Alkaloid T3O medium borderline
armoracia_rusticana_Arr27922 Alkaloid T3O medium borderline
armoracia_rusticana_Arr27927 Alkaloid T3O medium pass
armoracia_rusticana_Arr28080 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28081 Alkaloid T3O low borderline
armoracia_rusticana_Arr28082 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28209 Alkaloid T3O low borderline
armoracia_rusticana_Arr28211 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28342 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28343 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28344 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28345 Alkaloid T3O medium borderline
armoracia_rusticana_Arr28589 Alkaloid T3O medium borderline
armoracia_rusticana_Arr29538 Alkaloid T3O medium borderline
armoracia_rusticana_Arr29549 Alkaloid T3O low borderline
armoracia_rusticana_Arr29976 Alkaloid T3O medium pass
armoracia_rusticana_Arr30305 Alkaloid T3O medium borderline
armoracia_rusticana_Arr31061 Alkaloid T3O medium borderline
armoracia_rusticana_Arr31199 Alkaloid T3O medium borderline
armoracia_rusticana_Arr31286 Alkaloid T3O medium borderline
armoracia_rusticana_Arr32637 Alkaloid T3O medium pass
armoracia_rusticana_Arr32785 Alkaloid T3O medium pass
armoracia_rusticana_Arr33071 Alkaloid T3O low borderline
armoracia_rusticana_Arr33086 Alkaloid T3O medium pass
armoracia_rusticana_Arr33100 Alkaloid T3O low borderline
armoracia_rusticana_Arr33207 Alkaloid T3O medium borderline
armoracia_rusticana_Arr33222 Alkaloid T3O medium borderline
armoracia_rusticana_Arr34202 Alkaloid T3O low borderline
armoracia_rusticana_Arr34586 Alkaloid T3O low borderline
armoracia_rusticana_Arr35700 Alkaloid T3O medium borderline
armoracia_rusticana_Arr36 Alkaloid T3O low borderline
armoracia_rusticana_Arr36149 Alkaloid T3O low borderline