PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
armoracia_rusticana_Arr36545 Alkaloid T3O medium borderline
armoracia_rusticana_Arr3660 Alkaloid T3O medium borderline
armoracia_rusticana_Arr36639 Alkaloid T3O medium pass
armoracia_rusticana_Arr37064 Alkaloid T3O medium borderline
armoracia_rusticana_Arr37131 Alkaloid T3O medium borderline
armoracia_rusticana_Arr37527 Alkaloid T3O medium pass
armoracia_rusticana_Arr38020 Alkaloid T3O medium pass
armoracia_rusticana_Arr38204 Alkaloid T3O medium borderline
armoracia_rusticana_Arr38626 Alkaloid T3O medium borderline
armoracia_rusticana_Arr40070 Alkaloid T3O low borderline
armoracia_rusticana_Arr40393 Alkaloid T3O medium pass
armoracia_rusticana_Arr41824 Alkaloid T3O medium borderline
armoracia_rusticana_Arr4906 Alkaloid T3O medium pass
armoracia_rusticana_Arr529 Alkaloid T3O medium borderline
armoracia_rusticana_Arr530 Alkaloid T3O medium borderline
armoracia_rusticana_Arr532 Alkaloid T3O medium borderline
armoracia_rusticana_Arr533 Alkaloid T3O medium borderline
armoracia_rusticana_Arr5819 Alkaloid T3O low borderline
armoracia_rusticana_Arr5820 Alkaloid T3O low borderline
armoracia_rusticana_Arr6169 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6171 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6172 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6226 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6227 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6232 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6536 Alkaloid T3O medium pass
armoracia_rusticana_Arr6589 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6613 Alkaloid T3O medium borderline
armoracia_rusticana_Arr6914 Alkaloid T3O medium borderline
armoracia_rusticana_Arr7277 Alkaloid T3O medium borderline
armoracia_rusticana_Arr7533 Alkaloid T3O low borderline
armoracia_rusticana_Arr9223 Alkaloid T3O low borderline