Armoracia rusticana (armoracia_rusticana)
Imported from atlas release summary for Armoracia rusticana.
2486
Candidate Protein Records
1929
Pathway-Level Records
4837
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4837
Family-Level Calls
BAHD
6.47%
C3'H/CYP98A
6.12%
C4H
6.1%
POD
4.55%
4CL
4.53%
CYP76
4.03%
IFS
3.62%
UGT
3.39%
Other Families
61.19%
More Families (96)
7DLGT
144
2.98%
UFGT
142
2.94%
NMT
137
2.83%
T3O
132
2.73%
F3H
127
2.63%
DWF4/CYP90B1
120
2.48%
BR6OX2/CYP85A2
108
2.23%
STR
94
1.94%
F3'H/CYP75B
92
1.9%
CODM/T6ODM
87
1.8%
SMT1/SMT2/SMT3
75
1.55%
SGD
74
1.53%
H6H
67
1.39%
CSE
63
1.3%
CYP71
63
1.3%
IFR
59
1.22%
CAD
54
1.12%
G8O/G8H
52
1.08%
TRI/TRII
51
1.05%
T16H
50
1.03%
LAC
45
0.93%
IO
43
0.89%
TAT
42
0.87%
CAS
42
0.87%
BBE
40
0.83%
COMT
39
0.81%
FNS
38
0.79%
GS
37
0.76%
CCR
35
0.72%
ANR
32
0.66%
PYKS
31
0.64%
LAMT
31
0.64%
RAS
31
0.64%
SLS
30
0.62%
F3'5'H/CYP75A
29
0.6%
CYP90D1
27
0.56%
HCT
25
0.52%
PAL
24
0.5%
F5H/CYP84A
23
0.48%
CPD/CYP90A1
23
0.48%
BR6OX1/CYP85A1
22
0.45%
7DLH
21
0.43%
8HGO
20
0.41%
ANS/LDOX
20
0.41%
SQE
20
0.41%
CYP51G1
20
0.41%
NCS
18
0.37%
16OMT
18
0.37%
TPS
17
0.35%
GES
16
0.33%
DFR
16
0.33%
CPR
14
0.29%
FPPS
14
0.29%
COR
13
0.27%
MPO
13
0.27%
GGPPS
13
0.27%
PMT
12
0.25%
CCoAOMT
12
0.25%
AACT
11
0.23%
CNMT
10
0.21%
SMO1/SMO2
10
0.21%
CYP80B1
9
0.19%
CHS
9
0.19%
DET2
9
0.19%
ROT3/CYP90C1
9
0.19%
MVD
9
0.19%
MCT/IspD
9
0.19%
CYP719
8
0.17%
CHI
8
0.17%
CYP80F1
7
0.14%
DXS
7
0.14%
XMT_MXMT_DXMT
6
0.12%
ISY
5
0.1%
DWF7
5
0.1%
SQS/FDFT1
5
0.1%
DWF1
5
0.1%
HDS/IspG
5
0.1%
PMK
5
0.1%
MVK
5
0.1%
CPI1
4
0.08%
HMGR
4
0.08%
IDI
4
0.08%
TDC
3
0.06%
ADC
3
0.06%
FLS
3
0.06%
HPPR
3
0.06%
DWF5
3
0.06%
MDS/IspF
3
0.06%
HDR/IspH
3
0.06%
DXR
3
0.06%
TYDC_DDC
2
0.04%
FK
2
0.04%
HYD1
2
0.04%
CMK/IspE
2
0.04%
HMGS
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 551 | 21 | BAHD (247) | View species results |
| Phenylpropanoid pathway | 445 | 12 | POD (205) | View species results |
| Alkaloid pathway | 397 | 19 | NMT (81) | View species results |
| Flavonoid pathway | 231 | 10 | UFGT (131) | View species results |
| Rosmarinic acid pathway | 173 | 7 | C4H (65) | View species results |
| Steroid pathway | 132 | 14 | SMT1/SMT2/SMT3 (46) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1849 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 369 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| armoracia_rusticana_Arr12899 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr12956 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr12958 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr12959 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr12960 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr13141 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14011 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14184 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14224 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr14240 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14241 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14313 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr14570 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14696 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr14727 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14742 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14891 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14892 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr14940 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15002 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15207 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15370 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15371 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15657 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15749 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15750 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15751 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15864 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr15865 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15866 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15867 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr15880 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr16066 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr1609 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr16127 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr1620 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr16298 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr16593 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr16596 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr16761 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17143 | Rosmarinic Acid | C4H | medium | pass |
| armoracia_rusticana_Arr17365 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17481 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17593 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17611 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17654 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17826 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17852 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr17883 | Rosmarinic Acid | C4H | low | borderline |
| armoracia_rusticana_Arr18601 | Rosmarinic Acid | C4H | low | borderline |