PlantSME Plant secondary metabolism enzyme database

Armoracia rusticana (armoracia_rusticana)

Imported from atlas release summary for Armoracia rusticana.

1929
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 551 21 BAHD (247) View species results
Phenylpropanoid pathway 445 12 POD (205) View species results
Alkaloid pathway 397 19 NMT (81) View species results
Flavonoid pathway 231 10 UFGT (131) View species results
Rosmarinic acid pathway 173 7 C4H (65) View species results
Steroid pathway 132 14 SMT1/SMT2/SMT3 (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1849 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
armoracia_rusticana_Arr16985 Alkaloid COR low borderline
armoracia_rusticana_Arr18026 Alkaloid COR medium pass
armoracia_rusticana_Arr18455 Alkaloid COR medium pass
armoracia_rusticana_Arr2019 Alkaloid COR medium pass
armoracia_rusticana_Arr34275 Alkaloid COR medium pass
armoracia_rusticana_Arr36271 Alkaloid COR medium pass
armoracia_rusticana_Arr7301 Alkaloid COR medium pass
armoracia_rusticana_Arr10561 Alkaloid CYP719 low borderline
armoracia_rusticana_Arr12861 Alkaloid CYP719 low borderline
armoracia_rusticana_Arr17611 Alkaloid CYP719 medium borderline
armoracia_rusticana_Arr19210 Alkaloid CYP719 medium borderline
armoracia_rusticana_Arr24456 Alkaloid CYP719 medium borderline
armoracia_rusticana_Arr25940 Alkaloid CYP719 medium borderline
armoracia_rusticana_Arr33397 Alkaloid CYP719 medium borderline
armoracia_rusticana_Arr6181 Alkaloid CYP719 low borderline
armoracia_rusticana_Arr16066 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr29539 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr3558 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr36580 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr38322 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr41007 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr5512 Alkaloid CYP80B1 low borderline
armoracia_rusticana_Arr6441 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr9390 Alkaloid CYP80B1 medium borderline
armoracia_rusticana_Arr18145 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr19432 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr22284 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr22285 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr3673 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr4612 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr6168 Alkaloid CYP80F1 medium borderline
armoracia_rusticana_Arr10447 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr10470 Alkaloid G8O/G8H low borderline
armoracia_rusticana_Arr11660 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr11807 Alkaloid G8O/G8H low borderline
armoracia_rusticana_Arr12188 Alkaloid G8O/G8H low borderline
armoracia_rusticana_Arr12652 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr13141 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr15260 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr15657 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr1620 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr1624 Alkaloid G8O/G8H low borderline
armoracia_rusticana_Arr16593 Alkaloid G8O/G8H low borderline
armoracia_rusticana_Arr17826 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr17852 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr18913 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr20519 Alkaloid G8O/G8H low borderline
armoracia_rusticana_Arr20877 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr20878 Alkaloid G8O/G8H medium borderline
armoracia_rusticana_Arr22482 Alkaloid G8O/G8H medium borderline