PlantSME Plant secondary metabolism enzyme database

Avena atlantica (avena_atlantica)

Imported from atlas release summary for Avena atlantica.

2509
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 729 20 BAHD (263) View species results
Alkaloid pathway 589 23 7DLGT (118) View species results
Phenylpropanoid pathway 488 11 POD (247) View species results
Flavonoid pathway 372 12 UFGT (238) View species results
Rosmarinic acid pathway 217 7 C4H (114) View species results
Steroid pathway 114 12 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 467 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
AatlScoFOjO_1310_17880003000.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1310_17880007040.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1310_17880024180.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_1310_17880029420.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_1310_17880042240.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_1702_23380098580.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1702_23380099190.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1702_23380130370.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1760_23990136560.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1760_23990155750.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1760_23990170480.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1760_23990175810.1 Steroid CYP90D1 low borderline
AatlScoFOjO_1760_23990198020.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_1760_23990198070.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_2050_27120224740.1 Steroid CYP90D1 low borderline
AatlScoFOjO_2050_27120248510.1 Steroid CYP90D1 low borderline
AatlScoFOjO_2069_27320255670.1 Steroid CYP90D1 low borderline
AatlScoFOjO_2069_27320259300.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_2069_27320267700.1 Steroid CYP90D1 low borderline
AatlScoFOjO_2069_27320273980.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_2069_27320309080.1 Steroid CYP90D1 low borderline
AatlScoFOjO_2069_27320315150.1 Steroid CYP90D1 low borderline
AatlScoFOjO_2069_27320315650.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490325540.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490333820.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490336900.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490343250.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490381380.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490386320.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490386500.1 Steroid CYP90D1 low borderline
AatlScoFOjO_324_4490386610.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_350_4830394320.1 Steroid CYP90D1 low borderline
AatlScoFOjO_350_4830407980.1 Steroid CYP90D1 low borderline
AatlScoFOjO_350_4830408010.1 Steroid CYP90D1 low borderline
AatlScoFOjO_350_4830438410.1 Steroid CYP90D1 medium borderline
AatlScoFOjO_350_4830459530.1 Steroid CYP90D1 low borderline