PlantSME Plant secondary metabolism enzyme database

Avena atlantica (avena_atlantica)

Imported from atlas release summary for Avena atlantica.

2509
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 729 20 BAHD (263) View species results
Alkaloid pathway 589 23 7DLGT (118) View species results
Phenylpropanoid pathway 488 11 POD (247) View species results
Flavonoid pathway 372 12 UFGT (238) View species results
Rosmarinic acid pathway 217 7 C4H (114) View species results
Steroid pathway 114 12 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 467 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
AatlScoFOjO_324_4490329200.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490332610.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490346190.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490346200.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490346210.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490352210.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490357740.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490363160.1 Steroid DWF4/CYP90B1 medium borderline
AatlScoFOjO_324_4490370990.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490371940.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490372750.1 Steroid DWF4/CYP90B1 medium borderline
AatlScoFOjO_324_4490373080.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490377590.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490377600.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490377610.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490378540.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490383990.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490385130.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490385140.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_324_4490386600.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830390910.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830393640.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830403860.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830406010.1 Steroid DWF4/CYP90B1 medium borderline
AatlScoFOjO_350_4830428330.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830428340.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830428350.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830428370.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830446050.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830453440.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830458300.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830459510.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830459520.1 Steroid DWF4/CYP90B1 low borderline
AatlScoFOjO_350_4830464060.1 Steroid DWF4/CYP90B1 low borderline