PlantSME Plant secondary metabolism enzyme database

Avena atlantica (avena_atlantica)

Imported from atlas release summary for Avena atlantica.

2509
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 729 20 BAHD (263) View species results
Alkaloid pathway 589 23 7DLGT (118) View species results
Phenylpropanoid pathway 488 11 POD (247) View species results
Flavonoid pathway 372 12 UFGT (238) View species results
Rosmarinic acid pathway 217 7 C4H (114) View species results
Steroid pathway 114 12 SMT1/SMT2/SMT3 (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 467 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
AatlScoFOjO_2069_27320261090.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_2069_27320261100.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_2069_27320261200.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
AatlScoFOjO_2069_27320261760.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
AatlScoFOjO_2069_27320261770.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
AatlScoFOjO_2069_27320317920.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
AatlScoFOjO_2069_27320318740.1 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
AatlScoFOjO_223_3190319740.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_324_4490327430.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_324_4490334980.1 Terpenoid TPS medium pass TPS__00151__sp_Q1EG72_TPS11_MAIZE
AatlScoFOjO_324_4490345990.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
AatlScoFOjO_324_4490347670.1 Terpenoid TPS medium pass TPS__00058__sp_B2C4D0_TS23B_MAIZE
AatlScoFOjO_324_4490379770.1 Terpenoid TPS medium pass TPS__00058__sp_B2C4D0_TS23B_MAIZE
AatlScoFOjO_324_4490383770.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
AatlScoFOjO_324_4490385490.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_324_4490385950.1 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
AatlScoFOjO_324_4490386010.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_324_4490386460.1 Terpenoid TPS medium pass TPS__00112__sp_G0Y7D3_TPS3_LITCU
AatlScoFOjO_324_4490386480.1 Terpenoid TPS low borderline TPS__00062__sp_B9T536_TPS10_RICCO
AatlScoFOjO_324_4490387110.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_350_4830393350.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_350_4830403780.1 Terpenoid TPS low borderline TPS__00124__sp_I6RAQ6_TPS1_MATCR
AatlScoFOjO_350_4830403800.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
AatlScoFOjO_350_4830403820.1 Terpenoid TPS medium pass TPS__00124__sp_I6RAQ6_TPS1_MATCR
AatlScoFOjO_350_4830442990.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_504_6700490780.1 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
AatlScoFOjO_504_6700490790.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_513_6800490820.1 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
AatlScoFOjO_513_6800490830.1 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
AatlScoFOjO_513_6800490850.1 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
AatlScoFOjO_513_6800490870.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_518_6860490920.1 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
AatlScoFOjO_518_6860490940.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
AatlScoFOjO_547_7160491060.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE