PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bith1480036930 Flavonoid 4CL medium pass
Bith1660058200 Flavonoid 4CL medium pass
Bith1680064600 Flavonoid 4CL low borderline
Bith1760071410 Flavonoid 4CL medium pass
Bith1820082890 Flavonoid 4CL low borderline
Bith1880087040 Flavonoid 4CL medium pass
Bith1880087960 Flavonoid 4CL low borderline
Bith1930089960 Flavonoid 4CL medium pass
Bith2240118800 Flavonoid 4CL medium pass
Bith2580147450 Flavonoid 4CL low borderline
Bith260149210 Flavonoid 4CL medium pass
Bith2680158960 Flavonoid 4CL medium pass
Bith2680160540 Flavonoid 4CL low borderline
Bith320173130 Flavonoid 4CL low borderline
Bith320176270 Flavonoid 4CL low borderline
Bith320176370 Flavonoid 4CL medium pass
Bith40191620 Flavonoid 4CL medium pass
Bith500201090 Flavonoid 4CL medium pass
Bith500201950 Flavonoid 4CL medium pass
Bith50197750 Flavonoid 4CL medium pass
Bith50198560 Flavonoid 4CL medium pass
Bith60205120 Flavonoid 4CL low borderline
Bith610211270 Flavonoid 4CL medium pass
Bith680221560 Flavonoid 4CL low borderline
Bith70228180 Flavonoid 4CL low borderline
Bith790240950 Flavonoid 4CL low borderline
Bith790242610 Flavonoid 4CL low borderline
Bith923980260310 Flavonoid 4CL medium pass
Bith120022190 Flavonoid ANR medium borderline
Bith1850086560 Flavonoid ANR medium borderline
Bith1970095290 Flavonoid ANR medium borderline
Bith2360127380 Flavonoid ANR low borderline
Bith2580146640 Flavonoid ANR medium borderline
Bith2580146650 Flavonoid ANR medium borderline
Bith410193370 Flavonoid ANR medium borderline
Bith640217800 Flavonoid ANR medium pass
Bith70227630 Flavonoid ANR medium borderline
Bith1230022760 Flavonoid ANS/LDOX medium borderline
Bith1510043510 Flavonoid ANS/LDOX medium borderline
Bith2180106630 Flavonoid ANS/LDOX medium borderline
Bith2190108270 Flavonoid ANS/LDOX medium borderline
Bith2600151010 Flavonoid ANS/LDOX low borderline
Bith2340125090 Flavonoid C4H medium borderline
Bith2560143410 Flavonoid C4H low borderline
Bith710230950 Flavonoid C4H low borderline
Bith908380255760 Flavonoid C4H low borderline
Bith990264530 Flavonoid C4H medium borderline
Bith990264570 Flavonoid C4H medium borderline
Bith990265770 Flavonoid C4H medium borderline
Bith420195040 Flavonoid CHI medium pass