PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Bith1480036930 Phenylpropanoid 4CL medium pass
Bith1660058200 Phenylpropanoid 4CL medium pass
Bith1680064600 Phenylpropanoid 4CL low borderline
Bith1760071410 Phenylpropanoid 4CL medium pass
Bith1820082890 Phenylpropanoid 4CL low borderline
Bith1880087040 Phenylpropanoid 4CL medium pass
Bith1880087960 Phenylpropanoid 4CL low borderline
Bith1930089960 Phenylpropanoid 4CL medium pass
Bith2240118800 Phenylpropanoid 4CL medium pass
Bith2580147450 Phenylpropanoid 4CL low borderline
Bith260149210 Phenylpropanoid 4CL medium pass
Bith2680158960 Phenylpropanoid 4CL medium pass
Bith2680160540 Phenylpropanoid 4CL low borderline
Bith320173130 Phenylpropanoid 4CL low borderline
Bith320176270 Phenylpropanoid 4CL low borderline
Bith320176370 Phenylpropanoid 4CL medium pass
Bith40191620 Phenylpropanoid 4CL medium pass
Bith500201090 Phenylpropanoid 4CL medium pass
Bith500201950 Phenylpropanoid 4CL medium pass
Bith50197750 Phenylpropanoid 4CL medium pass
Bith50198560 Phenylpropanoid 4CL medium pass
Bith60205120 Phenylpropanoid 4CL low borderline
Bith610211270 Phenylpropanoid 4CL medium pass
Bith680221560 Phenylpropanoid 4CL low borderline
Bith70228180 Phenylpropanoid 4CL low borderline
Bith790240950 Phenylpropanoid 4CL low borderline
Bith790242610 Phenylpropanoid 4CL low borderline
Bith923980260310 Phenylpropanoid 4CL medium pass
Bith100012660 Phenylpropanoid C3'H/CYP98A medium borderline
Bith100014840 Phenylpropanoid C3'H/CYP98A low borderline
Bith10007620 Phenylpropanoid C3'H/CYP98A high pass
Bith10011050 Phenylpropanoid C3'H/CYP98A medium borderline
Bith120021720 Phenylpropanoid C3'H/CYP98A low borderline
Bith130024050 Phenylpropanoid C3'H/CYP98A low borderline
Bith130025140 Phenylpropanoid C3'H/CYP98A medium borderline
Bith130025290 Phenylpropanoid C3'H/CYP98A medium borderline
Bith130029750 Phenylpropanoid C3'H/CYP98A low borderline
Bith140033900 Phenylpropanoid C3'H/CYP98A low borderline
Bith1480037300 Phenylpropanoid C3'H/CYP98A medium borderline
Bith1480037530 Phenylpropanoid C3'H/CYP98A low borderline
Bith1480038850 Phenylpropanoid C3'H/CYP98A low borderline
Bith1530048430 Phenylpropanoid C3'H/CYP98A low borderline
Bith1530048500 Phenylpropanoid C3'H/CYP98A low borderline
Bith1570049800 Phenylpropanoid C3'H/CYP98A low borderline
Bith1570052290 Phenylpropanoid C3'H/CYP98A medium borderline
Bith1660059080 Phenylpropanoid C3'H/CYP98A medium borderline
Bith1660061530 Phenylpropanoid C3'H/CYP98A medium borderline
Bith1690067360 Phenylpropanoid C3'H/CYP98A medium borderline
Bith1760071350 Phenylpropanoid C3'H/CYP98A low borderline
Bith1770072580 Phenylpropanoid C3'H/CYP98A medium borderline