PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

922
Candidate Protein Records
652
Pathway-Level Records
1736
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bith260149360 Alkaloid T3O medium borderline
Bith2670157130 Alkaloid T3O medium pass
Bith290164890 Alkaloid T3O medium borderline
Bith320173750 Alkaloid T3O medium borderline
Bith370190250 Alkaloid T3O low borderline
Bith460196230 Alkaloid T3O medium borderline
Bith490196690 Alkaloid T3O medium borderline
Bith500201960 Alkaloid T3O medium borderline
Bith500202020 Alkaloid T3O medium borderline
Bith610212560 Alkaloid T3O medium borderline
Bith620390215350 Alkaloid T3O low borderline
Bith90250230 Alkaloid T3O medium pass
Bith90250810 Alkaloid T3O medium borderline
Bith908380255760 Alkaloid T3O low borderline
Bith100012440 Alkaloid TDC low borderline
Bith1680063010 Alkaloid TDC low borderline
Bith2230112660 Alkaloid TDC low borderline
Bith260149220 Alkaloid TDC medium borderline
Bith990266690 Alkaloid TDC low borderline
Bith1590055370 Alkaloid TRI/TRII low borderline
Bith1790080440 Alkaloid TRI/TRII medium pass
Bith1920089300 Alkaloid TRI/TRII low borderline
Bith1970098170 Alkaloid TRI/TRII medium pass
Bith2480136060 Alkaloid TRI/TRII low borderline
Bith2560143530 Alkaloid TRI/TRII low borderline
Bith2580146970 Alkaloid TRI/TRII low borderline
Bith2680158610 Alkaloid TRI/TRII medium pass
Bith2700162640 Alkaloid TRI/TRII medium pass
Bith320175810 Alkaloid TRI/TRII medium pass
Bith640216140 Alkaloid TRI/TRII medium pass
Bith640217360 Alkaloid TRI/TRII medium pass
Bith710230100 Alkaloid TRI/TRII medium pass
Bith720237410 Alkaloid TRI/TRII medium pass
Bith880248700 Alkaloid TRI/TRII medium pass
Bith915220257270 Alkaloid TRI/TRII low borderline
Bith916270257560 Alkaloid TRI/TRII low borderline
Bith921740259210 Alkaloid TRI/TRII medium pass
Bith921910259320 Alkaloid TRI/TRII medium pass
Bith1303490031840 Alkaloid TYDC_DDC low borderline
Bith2590148630 Alkaloid TYDC_DDC medium borderline
Bith260149570 Alkaloid TYDC_DDC medium borderline
Bith260149580 Alkaloid TYDC_DDC medium borderline
Bith90250020 Alkaloid TYDC_DDC low borderline
Bith990266730 Alkaloid TYDC_DDC low borderline