Bartramia ithyphylla (bartramia_ithyphylla)
Imported from atlas release summary for Bartramia ithyphylla.
652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
652
Candidate Genes
C4H
6.68%
C3'H/CYP98A
5.59%
BAHD
5.24%
POD
4.9%
4CL
4.84%
CYP76
4.38%
NMT
3.69%
IFS
2.71%
Other Families
61.98%
More Families (95)
DWF4/CYP90B1
41
2.36%
BR6OX2/CYP85A2
41
2.36%
F3H
40
2.3%
T3O
39
2.25%
STR
39
2.25%
F3'H/CYP75B
37
2.13%
UGT
36
2.07%
IFR
35
2.02%
PYKS
34
1.96%
GS
33
1.9%
7DLGT
33
1.9%
UFGT
32
1.84%
PAL
30
1.73%
CODM/T6ODM
24
1.38%
CAD
22
1.27%
CHS
21
1.21%
IO
19
1.09%
H6H
19
1.09%
TRI/TRII
19
1.09%
SMT1/SMT2/SMT3
19
1.09%
CYP71
19
1.09%
T16H
18
1.04%
F3'5'H/CYP75A
18
1.04%
LAC
18
1.04%
COMT
17
0.98%
RAS
16
0.92%
HCT
15
0.86%
SLS
14
0.81%
NCS
13
0.75%
7DLH
12
0.69%
CYP90D1
12
0.69%
CAS
12
0.69%
G8O/G8H
11
0.63%
F5H/CYP84A
11
0.63%
CYP80B1
10
0.58%
CNMT
10
0.58%
8HGO
9
0.52%
SGD
9
0.52%
ANR
9
0.52%
FNS
9
0.52%
CSE
9
0.52%
CPD/CYP90A1
9
0.52%
PMT
8
0.46%
16OMT
8
0.46%
COR
8
0.46%
LAMT
7
0.4%
AACT
7
0.4%
TYDC_DDC
6
0.35%
DFR
6
0.35%
CCR
6
0.35%
SQS/FDFT1
6
0.35%
TPS
6
0.35%
TDC
5
0.29%
BBE
5
0.29%
ISY
5
0.29%
ANS/LDOX
5
0.29%
CPR
5
0.29%
GGPPS
5
0.29%
HDS/IspG
5
0.29%
HDR/IspH
5
0.29%
MPO
4
0.23%
FLS
4
0.23%
BR6OX1/CYP85A1
4
0.23%
DWF5
4
0.23%
SQE
4
0.23%
ROT3/CYP90C1
4
0.23%
DET2
4
0.23%
FPPS
4
0.23%
MVK
4
0.23%
DXR
3
0.17%
ADC
2
0.12%
CYP80F1
2
0.12%
GES
2
0.12%
CYP719
2
0.12%
CHI
2
0.12%
TAT
2
0.12%
SMO1/SMO2
2
0.12%
DXS
2
0.12%
MCT/IspD
2
0.12%
HMGR
2
0.12%
MVD
2
0.12%
6OMT_4OMT_SOMT
1
0.06%
CCoAOMT
1
0.06%
HPPR
1
0.06%
CYP51G1
1
0.06%
DWF1
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
HYD1
1
0.06%
PMK
1
0.06%
MDS/IspF
1
0.06%
CMK/IspE
1
0.06%
IDI
1
0.06%
HMGS
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 168 | 12 | POD (80) | View species results |
| Terpenoid pathway | 161 | 19 | BAHD (59) | View species results |
| Alkaloid pathway | 136 | 19 | NMT (26) | View species results |
| Flavonoid pathway | 87 | 10 | UFGT (29) | View species results |
| Rosmarinic acid pathway | 67 | 7 | C4H (31) | View species results |
| Steroid pathway | 33 | 12 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 660 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 122 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bith2010102370 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Bith2150103400 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bith2270122260 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Bith2340124010 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Bith2390129560 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| Bith2560140880 | Terpenoid | BAHD | low | borderline | BAHD__00067__sp_Q9ASU1_DGAT2_ARATH |
| Bith2560144510 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bith2590148880 | Terpenoid | BAHD | low | borderline | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Bith2600149960 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Bith2600150470 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Bith2640153780 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| Bith2640154810 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| Bith2670156250 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Bith2670157300 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| Bith2690161880 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Bith30170200 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Bith3310183170 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Bith3310183250 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Bith3320184020 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Bith340186450 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Bith380190820 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Bith40191480 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Bith40192270 | Terpenoid | BAHD | low | borderline | BAHD__00002__sp_A0A068BIF1_AT9_ACTER |
| Bith420194000 | Terpenoid | BAHD | low | borderline | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Bith420194640 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Bith500202540 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Bith50198090 | Terpenoid | BAHD | low | borderline | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Bith50198540 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| Bith50200050 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bith60208750 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Bith610212420 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| Bith680221150 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Bith680221590 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| Bith70227130 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Bith70227330 | Terpenoid | BAHD | medium | pass | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| Bith70227360 | Terpenoid | BAHD | low | borderline | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| Bith70227410 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Bith710229990 | Terpenoid | BAHD | medium | pass | BAHD__00053__sp_Q8GXU8_LPAT1_ARATH |
| Bith710231100 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Bith710232240 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Bith720235830 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Bith720235870 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Bith850245860 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Bith880248020 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| Bith880248560 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Bith90251540 | Terpenoid | BAHD | medium | pass | BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY |
| Bith90254240 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Bith917370257710 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Bith2480135870 | Terpenoid | CMK/IspE | high | pass | CMK_IspE__00001__sp_O81014_ISPE_ARATH |
| Bith1570051490 | Terpenoid | CYP71 | medium | pass | CYP71__00001__sp_Q8W4D0_CPY71_ARATH |