PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bith2270122570 Flavonoid F3H medium borderline
Bith2590148350 Flavonoid F3H medium borderline
Bith2620152640 Flavonoid F3H medium borderline
Bith2680157360 Flavonoid F3H low borderline
Bith300172140 Flavonoid F3H low borderline
Bith3320184240 Flavonoid F3H medium borderline
Bith3470187660 Flavonoid F3H medium borderline
Bith460195900 Flavonoid F3H medium borderline
Bith50197810 Flavonoid F3H medium borderline
Bith60208400 Flavonoid F3H medium borderline
Bith60208680 Flavonoid F3H medium borderline
Bith610214430 Flavonoid F3H medium borderline
Bith670218510 Flavonoid F3H low borderline
Bith70222500 Flavonoid F3H medium borderline
Bith70224010 Flavonoid F3H medium borderline
Bith70225550 Flavonoid F3H medium borderline
Bith70225600 Flavonoid F3H medium borderline
Bith70225610 Flavonoid F3H low borderline
Bith720237050 Flavonoid F3H medium borderline
Bith730237840 Flavonoid F3H medium pass
Bith790241970 Flavonoid F3H medium borderline
Bith790243330 Flavonoid F3H medium borderline
Bith990262680 Flavonoid F3H low borderline
Bith1690068940 Flavonoid FLS medium borderline
Bith2020102510 Flavonoid FLS medium borderline
Bith70222510 Flavonoid FLS medium borderline
Bith70225570 Flavonoid FLS medium borderline
Bith1790076890 Flavonoid FNS medium borderline
Bith2280122660 Flavonoid FNS medium borderline
Bith2410130980 Flavonoid FNS medium borderline
Bith260149290 Flavonoid FNS medium borderline
Bith2670157130 Flavonoid FNS medium borderline
Bith3470189280 Flavonoid FNS medium borderline
Bith3470189290 Flavonoid FNS medium borderline
Bith610212940 Flavonoid FNS medium borderline
Bith70226890 Flavonoid FNS medium borderline
Bith10002240 Flavonoid IFR low borderline
Bith10005800 Flavonoid IFR low borderline
Bith10006120 Flavonoid IFR low borderline
Bith1030016290 Flavonoid IFR low borderline
Bith1480038230 Flavonoid IFR low borderline
Bith1490040880 Flavonoid IFR low borderline
Bith1590055330 Flavonoid IFR low borderline
Bith1660058920 Flavonoid IFR high pass
Bith1660061470 Flavonoid IFR low borderline
Bith1660061500 Flavonoid IFR low borderline
Bith1690067180 Flavonoid IFR low borderline
Bith1690069080 Flavonoid IFR low borderline
Bith1770073990 Flavonoid IFR low borderline
Bith1840084070 Flavonoid IFR low borderline