PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
Bith580203670 Alkaloid IO medium borderline
Bith60207910 Alkaloid IO low borderline
Bith620390215340 Alkaloid IO low borderline
Bith70225030 Alkaloid IO medium borderline
Bith710229760 Alkaloid IO low borderline
Bith830270244380 Alkaloid IO medium borderline
Bith923900260250 Alkaloid IO low borderline
Bith990264530 Alkaloid IO medium borderline
Bith990264570 Alkaloid IO medium borderline
Bith990265770 Alkaloid IO medium borderline
Bith1690066450 Alkaloid ISY medium pass
Bith1780076730 Alkaloid ISY low borderline
Bith2560144260 Alkaloid ISY high pass
Bith720235310 Alkaloid ISY medium pass
Bith915570257430 Alkaloid ISY low borderline
Bith1070020110 Alkaloid LAMT low borderline
Bith1070020120 Alkaloid LAMT low borderline
Bith2580147530 Alkaloid LAMT medium pass
Bith2670156040 Alkaloid LAMT low borderline
Bith40193120 Alkaloid LAMT medium borderline
Bith70223540 Alkaloid LAMT medium borderline
Bith70223660 Alkaloid LAMT medium pass
Bith10009870 Alkaloid MPO medium pass
Bith1570049270 Alkaloid MPO high pass
Bith1970094960 Alkaloid MPO high pass
Bith790241010 Alkaloid MPO medium pass
Bith00000800 Alkaloid NCS low borderline
Bith10003920 Alkaloid NCS medium borderline
Bith10009270 Alkaloid NCS medium borderline
Bith1570053690 Alkaloid NCS low borderline
Bith1790076920 Alkaloid NCS medium borderline
Bith1820082460 Alkaloid NCS low borderline
Bith1850086320 Alkaloid NCS low borderline
Bith2250120890 Alkaloid NCS low borderline
Bith60207610 Alkaloid NCS low borderline
Bith670218510 Alkaloid NCS medium borderline
Bith70222500 Alkaloid NCS medium borderline
Bith70225570 Alkaloid NCS medium borderline
Bith70225610 Alkaloid NCS medium borderline
Bith100012590 Alkaloid NMT low borderline
Bith100013590 Alkaloid NMT low borderline
Bith100013750 Alkaloid NMT medium pass
Bith10003780 Alkaloid NMT low borderline
Bith10008420 Alkaloid NMT medium pass
Bith10008430 Alkaloid NMT medium pass
Bith1030016160 Alkaloid NMT medium pass
Bith130028960 Alkaloid NMT medium pass
Bith130029200 Alkaloid NMT medium pass
Bith130031470 Alkaloid NMT medium pass
Bith1480036750 Alkaloid NMT low borderline