PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

922
Candidate Protein Records
652
Pathway-Level Records
1736
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bith850246120 Alkaloid NMT low borderline
Bith90253140 Alkaloid NMT medium borderline
Bith90254960 Alkaloid NMT medium pass
Bith10009050 Alkaloid PMT medium borderline
Bith1530046480 Alkaloid PMT low borderline
Bith1770073260 Alkaloid PMT low borderline
Bith2270122260 Alkaloid PMT low borderline
Bith320173290 Alkaloid PMT low borderline
Bith680221150 Alkaloid PMT low borderline
Bith70227390 Alkaloid PMT medium pass
Bith720235850 Alkaloid PMT medium pass
Bith100014010 Alkaloid PYKS high pass
Bith100014050 Alkaloid PYKS high pass
Bith100014060 Alkaloid PYKS medium pass
Bith100014070 Alkaloid PYKS high pass
Bith130025440 Alkaloid PYKS high pass
Bith130026060 Alkaloid PYKS high pass
Bith1480038490 Alkaloid PYKS medium pass
Bith1480039500 Alkaloid PYKS low borderline
Bith1580053930 Alkaloid PYKS low borderline
Bith1690069800 Alkaloid PYKS low borderline
Bith1700070210 Alkaloid PYKS medium pass
Bith1700070220 Alkaloid PYKS medium pass
Bith1820081820 Alkaloid PYKS high pass
Bith1820081830 Alkaloid PYKS high pass
Bith1920088970 Alkaloid PYKS low borderline
Bith1960090680 Alkaloid PYKS low borderline
Bith220109790 Alkaloid PYKS low borderline
Bith2240115820 Alkaloid PYKS medium pass
Bith2410132310 Alkaloid PYKS high pass
Bith2520137450 Alkaloid PYKS low borderline
Bith2560143400 Alkaloid PYKS high pass
Bith2560144360 Alkaloid PYKS low borderline
Bith2560144770 Alkaloid PYKS high pass
Bith320173030 Alkaloid PYKS low borderline
Bith3220177570 Alkaloid PYKS low borderline
Bith610210870 Alkaloid PYKS low borderline
Bith626640215550 Alkaloid PYKS low borderline
Bith640217920 Alkaloid PYKS low borderline
Bith70223770 Alkaloid PYKS high pass
Bith710230690 Alkaloid PYKS high pass
Bith710231210 Alkaloid PYKS high pass
Bith830890244410 Alkaloid PYKS high pass
Bith921610259160 Alkaloid PYKS high pass
Bith923170259800 Alkaloid PYKS high pass
Bith120022040 Alkaloid SGD medium pass
Bith1970094710 Alkaloid SGD medium pass
Bith20101840 Alkaloid SGD low borderline
Bith2180104190 Alkaloid SGD low borderline
Bith500201900 Alkaloid SGD medium pass