Begonia fuchsioides (begonia_fuchsioides)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 28.34% Phenylpropanoid pathway 22.24% Alkaloid pathway 19.41% Flavonoid pathway 12.72% Rosmarinic acid pathway 10.09% Steroid pathway 7.2%

Family Distribution

1556 Candidate Genes

BAHD 6.24% C4H 6.11% C3'H/CYP98A 5.54% 4CL 4.87% POD 4.42% IFS 3.69% CYP76 3.69% T3O 3.39%

Other Families 62.05%

More Families (94)

UGT 109 2.72% 7DLGT 104 2.59% UFGT 104 2.59% F3H 102 2.54% NMT 98 2.45% STR 87 2.17% DWF4/CYP90B1 85 2.12% F3'H/CYP75B 73 1.82% BR6OX2/CYP85A2 69 1.72% CAD 67 1.67% IFR 61 1.52% SMT1/SMT2/SMT3 61 1.52% CODM/T6ODM 57 1.42% CYP71 50 1.25% PYKS 49 1.22% CSE 49 1.22% CAS 49 1.22% H6H 47 1.17% TRI/TRII 44 1.1% CYP90D1 41 1.02% HCT 40 1.0% TPS 38 0.95% ANR 37 0.92% LAC 37 0.92% RAS 37 0.92% GES 36 0.9% T16H 33 0.82% TAT 32 0.8% PMT 31 0.77% G8O/G8H 30 0.75% GS 30 0.75% PAL 30 0.75% F5H/CYP84A 30 0.75% IO 26 0.65% F3'5'H/CYP75A 26 0.65% NCS 25 0.62% CCR 25 0.62% COMT 24 0.6% CPD/CYP90A1 24 0.6% SLS 22 0.55% FNS 22 0.55% BBE 20 0.5% CYP51G1 20 0.5% ROT3/CYP90C1 17 0.42% BR6OX1/CYP85A1 17 0.42% 7DLH 16 0.4% 16OMT 15 0.37% SGD 15 0.37% CHS 15 0.37% MPO 14 0.35% 8HGO 13 0.32% CPR 13 0.32% SQE 13 0.32% CNMT 12 0.3% CYP719 12 0.3% DFR 12 0.3% CCoAOMT 12 0.3% AACT 12 0.3% FPPS 12 0.3% LAMT 10 0.25% ANS/LDOX 10 0.25% SQS/FDFT1 10 0.25% SMO1/SMO2 10 0.25% CYP80B1 9 0.22% COR 9 0.22% GGPPS 9 0.22% DET2 8 0.2% HMGR 8 0.2% MVD 8 0.2% DWF7 7 0.17% MVK 7 0.17% ISY 6 0.15% TDC 6 0.15% CHI 6 0.15% TYDC_DDC 5 0.12% HPPR 5 0.12% HYD1 5 0.12% DXS 5 0.12% ADC 4 0.1% DWF1 4 0.1% XMT_MXMT_DXMT 3 0.07% MDS/IspF 3 0.07% IDI 3 0.07% HMGS 3 0.07% DXR 3 0.07% HDR/IspH 3 0.07% PMK 3 0.07% FLS 2 0.05% DWF5 2 0.05% FK 2 0.05% CPI1 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% HDS/IspG 2 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	441	19	BAHD (193)	View species results
Phenylpropanoid pathway	346	12	POD (150)	View species results
Alkaloid pathway	302	22	NMT (47)	View species results
Flavonoid pathway	198	11	UFGT (96)	View species results
Rosmarinic acid pathway	157	7	C4H (51)	View species results
Steroid pathway	112	12	SMT1/SMT2/SMT3 (35)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	1499	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	327	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
Bfucscaffold3993_cov1380309190	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold4136_cov1280314350	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bfucscaffold4136_cov1280314480	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bfucscaffold41469_cov1540315960	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bfucscaffold4149_cov1210316670	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold4195_cov1170318470	Terpenoid	BAHD	medium	pass	BAHD__00031__sp_P0DO25_AT9_ACTDE
Bfucscaffold4293_cov1560322940	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bfucscaffold4295_cov1540323510	Terpenoid	BAHD	medium	pass	BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
Bfucscaffold43094_cov1620324380	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
Bfucscaffold4328_cov1560325300	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold4338_cov1460326000	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Bfucscaffold4366_cov1390327680	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX
Bfucscaffold4366_cov1390327690	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX
Bfucscaffold4391_cov1430330700	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bfucscaffold4412_cov1230331450	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bfucscaffold4412_cov1230331510	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bfucscaffold4459_cov1090332670	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold445_cov1330332870	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
Bfucscaffold4464_cov1840333460	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bfucscaffold4464_cov1840335330	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold4464_cov1840335540	Terpenoid	BAHD	medium	pass	BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bfucscaffold4478_cov1240337060	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bfucscaffold449_cov1580340440	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bfucscaffold4627_cov1610345150	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bfucscaffold4761_cov1340349160	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bfucscaffold4761_cov1340349420	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Bfucscaffold4761_cov1340349920	Terpenoid	BAHD	medium	pass	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Bfucscaffold4775_cov1190350770	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Bfucscaffold4799_cov1660352130	Terpenoid	BAHD	low	borderline	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold479_cov1360352530	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
Bfucscaffold5068_cov1420362070	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bfucscaffold5074_cov1430363110	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
Bfucscaffold530_cov1300368570	Terpenoid	BAHD	medium	pass	BAHD__00024__sp_O23393_BIA1_ARATH
Bfucscaffold5381_cov1610373140	Terpenoid	BAHD	medium	pass	BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
Bfucscaffold54_cov1780375340	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Bfucscaffold5619_cov1630379290	Terpenoid	BAHD	medium	pass	BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
Bfucscaffold5619_cov1630379520	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bfucscaffold5619_cov1630379790	Terpenoid	BAHD	medium	pass	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Bfucscaffold5619_cov1630379980	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Bfucscaffold5619_cov1630380000	Terpenoid	BAHD	low	borderline	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bfucscaffold5634_cov1200380990	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
Bfucscaffold56566_cov1780381650	Terpenoid	BAHD	low	borderline	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Bfucscaffold573_cov1610382990	Terpenoid	BAHD	medium	pass	BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
Bfucscaffold58542_cov1250386940	Terpenoid	BAHD	low	borderline	BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
Bfucscaffold5976_cov1350388470	Terpenoid	BAHD	medium	pass	BAHD__00089__sp_Q9SB58_ZDH19_ARATH
Bfucscaffold6026_cov1430390490	Terpenoid	BAHD	medium	pass	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Bfucscaffold6026_cov1430390530	Terpenoid	BAHD	medium	pass	BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
Bfucscaffold6127_cov1280393820	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bfucscaffold6228_cov1510397810	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Bfucscaffold62549_cov1560399810	Terpenoid	BAHD	medium	pass	BAHD__00031__sp_P0DO25_AT9_ACTDE