Begonia fuchsioides (begonia_fuchsioides)
Imported from atlas release summary for Begonia fuchsioides.
1556
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1556
Candidate Genes
BAHD
6.24%
C4H
6.11%
C3'H/CYP98A
5.54%
4CL
4.87%
POD
4.42%
IFS
3.69%
CYP76
3.69%
T3O
3.39%
Other Families
62.05%
More Families (94)
UGT
109
2.72%
7DLGT
104
2.59%
UFGT
104
2.59%
F3H
102
2.54%
NMT
98
2.45%
STR
87
2.17%
DWF4/CYP90B1
85
2.12%
F3'H/CYP75B
73
1.82%
BR6OX2/CYP85A2
69
1.72%
CAD
67
1.67%
IFR
61
1.52%
SMT1/SMT2/SMT3
61
1.52%
CODM/T6ODM
57
1.42%
CYP71
50
1.25%
PYKS
49
1.22%
CSE
49
1.22%
CAS
49
1.22%
H6H
47
1.17%
TRI/TRII
44
1.1%
CYP90D1
41
1.02%
HCT
40
1.0%
TPS
38
0.95%
ANR
37
0.92%
LAC
37
0.92%
RAS
37
0.92%
GES
36
0.9%
T16H
33
0.82%
TAT
32
0.8%
PMT
31
0.77%
G8O/G8H
30
0.75%
GS
30
0.75%
PAL
30
0.75%
F5H/CYP84A
30
0.75%
IO
26
0.65%
F3'5'H/CYP75A
26
0.65%
NCS
25
0.62%
CCR
25
0.62%
COMT
24
0.6%
CPD/CYP90A1
24
0.6%
SLS
22
0.55%
FNS
22
0.55%
BBE
20
0.5%
CYP51G1
20
0.5%
ROT3/CYP90C1
17
0.42%
BR6OX1/CYP85A1
17
0.42%
7DLH
16
0.4%
16OMT
15
0.37%
SGD
15
0.37%
CHS
15
0.37%
MPO
14
0.35%
8HGO
13
0.32%
CPR
13
0.32%
SQE
13
0.32%
CNMT
12
0.3%
CYP719
12
0.3%
DFR
12
0.3%
CCoAOMT
12
0.3%
AACT
12
0.3%
FPPS
12
0.3%
LAMT
10
0.25%
ANS/LDOX
10
0.25%
SQS/FDFT1
10
0.25%
SMO1/SMO2
10
0.25%
CYP80B1
9
0.22%
COR
9
0.22%
GGPPS
9
0.22%
DET2
8
0.2%
HMGR
8
0.2%
MVD
8
0.2%
DWF7
7
0.17%
MVK
7
0.17%
ISY
6
0.15%
TDC
6
0.15%
CHI
6
0.15%
TYDC_DDC
5
0.12%
HPPR
5
0.12%
HYD1
5
0.12%
DXS
5
0.12%
ADC
4
0.1%
DWF1
4
0.1%
XMT_MXMT_DXMT
3
0.07%
MDS/IspF
3
0.07%
IDI
3
0.07%
HMGS
3
0.07%
DXR
3
0.07%
HDR/IspH
3
0.07%
PMK
3
0.07%
FLS
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
CPI1
2
0.05%
CMK/IspE
2
0.05%
MCT/IspD
2
0.05%
HDS/IspG
2
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 441 | 19 | BAHD (193) | View species results |
| Phenylpropanoid pathway | 346 | 12 | POD (150) | View species results |
| Alkaloid pathway | 302 | 22 | NMT (47) | View species results |
| Flavonoid pathway | 198 | 11 | UFGT (96) | View species results |
| Rosmarinic acid pathway | 157 | 7 | C4H (51) | View species results |
| Steroid pathway | 112 | 12 | SMT1/SMT2/SMT3 (35) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1499 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 327 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bfucscaffold62549_cov1560399920 | Terpenoid | BAHD | low | borderline | BAHD__00024__sp_O23393_BIA1_ARATH |
| Bfucscaffold646_cov1400405050 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Bfucscaffold6841_cov1140411930 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Bfucscaffold7004_cov1150414320 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Bfucscaffold7005_cov1380414330 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Bfucscaffold70929_cov1530415580 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Bfucscaffold7181_cov1240416090 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| Bfucscaffold719_cov1380417360 | Terpenoid | BAHD | medium | pass | BAHD__00069__sp_Q9C5W0_DGAT3_ARATH |
| Bfucscaffold719_cov1380417410 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Bfucscaffold724_cov1720420660 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| Bfucscaffold7344_cov1460422740 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Bfucscaffold745_cov1790427300 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| Bfucscaffold762_cov1320431990 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Bfucscaffold7640_cov1270432070 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bfucscaffold7640_cov1270432080 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bfucscaffold7640_cov1270432090 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bfucscaffold7640_cov1270432100 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bfucscaffold781_cov1310434480 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bfucscaffold781_cov1310434690 | Terpenoid | BAHD | low | borderline | BAHD__00033__sp_P0DXG0_AT_STRYX |
| Bfucscaffold797_cov1480438020 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Bfucscaffold817_cov1600442930 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| Bfucscaffold81_cov1920444790 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| Bfucscaffold83_cov1420451060 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Bfucscaffold842_cov1300451650 | Terpenoid | BAHD | low | borderline | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Bfucscaffold850_cov1560454950 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Bfucscaffold850_cov1560455520 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Bfucscaffold850_cov1560455830 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Bfucscaffold850_cov1560456350 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| Bfucscaffold856_cov1840457030 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| Bfucscaffold878_cov1110461050 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Bfucscaffold87_cov1410461650 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Bfucscaffold8860_cov1690463520 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| Bfucscaffold90_cov1440467220 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Bfucscaffold91181_cov1420468420 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Bfucscaffold91251_cov1740471250 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Bfucscaffold91273_cov1420472800 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Bfucscaffold91273_cov1420472810 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Bfucscaffold91297_cov1650474960 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Bfucscaffold91298_cov1920475470 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Bfucscaffold91298_cov1920475740 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Bfucscaffold91305_cov1310476290 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Bfucscaffold91340_cov1700479410 | Terpenoid | BAHD | medium | pass | BAHD__00050__sp_Q6DR03_ZDHC3_ARATH |
| Bfucscaffold91340_cov1700479670 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Bfucscaffold91372_cov1680480990 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Bfucscaffold91390_cov1700482570 | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Bfucscaffold91414_cov1660483820 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Bfucscaffold91434_cov1520485230 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Bfucscaffold91435_cov1580485690 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Bfucscaffold91842_cov2040494400 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Bfucscaffold91844_cov1370494690 | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |