Calliergonella cuspidata (calliergonella_cuspidata)
Imported from atlas release summary for Calliergonella cuspidata.
927
Candidate Protein Records
703
Pathway-Level Records
1829
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1829
Family-Level Calls
C4H
7.49%
C3'H/CYP98A
6.12%
POD
5.08%
BAHD
4.87%
4CL
4.76%
CYP76
4.65%
PAL
4.59%
NMT
3.23%
Other Families
59.21%
More Families (94)
IFS
52
2.84%
F3'H/CYP75B
51
2.79%
PYKS
41
2.24%
DWF4/CYP90B1
41
2.24%
BR6OX2/CYP85A2
40
2.19%
STR
37
2.02%
T3O
37
2.02%
IFR
36
1.97%
F3H
35
1.91%
GS
33
1.8%
UGT
30
1.64%
UFGT
29
1.59%
CHS
29
1.59%
7DLGT
27
1.48%
IO
26
1.42%
CODM/T6ODM
22
1.2%
CAD
22
1.2%
SMT1/SMT2/SMT3
20
1.09%
CYP90D1
19
1.04%
7DLH
18
0.98%
TRI/TRII
18
0.98%
SLS
18
0.98%
CAS
17
0.93%
T16H
16
0.87%
G8O/G8H
15
0.82%
H6H
15
0.82%
COMT
15
0.82%
CYP71
15
0.82%
FNS
13
0.71%
LAMT
12
0.66%
CSE
12
0.66%
NCS
11
0.6%
F3'5'H/CYP75A
11
0.6%
F5H/CYP84A
10
0.55%
RAS
10
0.55%
CPD/CYP90A1
10
0.55%
8HGO
9
0.49%
CYP80B1
9
0.49%
ANR
9
0.49%
HCT
9
0.49%
LAC
8
0.44%
16OMT
7
0.38%
CNMT
7
0.38%
SGD
7
0.38%
COR
7
0.38%
GGPPS
7
0.38%
MPO
6
0.33%
CCR
6
0.33%
SQS/FDFT1
6
0.33%
PMT
5
0.27%
CYP719
5
0.27%
TDC
5
0.27%
BBE
5
0.27%
CPR
5
0.27%
TAT
5
0.27%
AACT
5
0.27%
MVD
5
0.27%
DWF5
4
0.22%
CYP51G1
4
0.22%
BR6OX1/CYP85A1
4
0.22%
HYD1
4
0.22%
ROT3/CYP90C1
4
0.22%
HDS/IspG
4
0.22%
6OMT_4OMT_SOMT
3
0.16%
ADC
3
0.16%
GES
3
0.16%
FLS
3
0.16%
CHI
3
0.16%
SQE
3
0.16%
DET2
3
0.16%
MVK
3
0.16%
FPPS
3
0.16%
TPS
3
0.16%
TYDC_DDC
2
0.11%
DFR
2
0.11%
SMO1/SMO2
2
0.11%
DWF1
2
0.11%
HMGS
2
0.11%
HDR/IspH
2
0.11%
MDS/IspF
2
0.11%
MCT/IspD
2
0.11%
ISY
1
0.05%
ANS/LDOX
1
0.05%
CCoAOMT
1
0.05%
HPPR
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
FK
1
0.05%
DXR
1
0.05%
IDI
1
0.05%
CMK/IspE
1
0.05%
PMK
1
0.05%
DXS
1
0.05%
HMGR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 176 | 11 | POD (86) | View species results |
| Terpenoid pathway | 167 | 19 | BAHD (65) | View species results |
| Alkaloid pathway | 137 | 18 | PYKS (29) | View species results |
| Flavonoid pathway | 107 | 12 | CHS (29) | View species results |
| Rosmarinic acid pathway | 76 | 7 | PAL (26) | View species results |
| Steroid pathway | 40 | 12 | CAS (14) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 739 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 108 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Ccusscaffold_50115050 | Alkaloid | SGD | low | borderline |
| Ccusscaffold_50134290 | Alkaloid | SGD | low | borderline |
| Ccusscaffold_60165960 | Alkaloid | SGD | low | borderline |
| Ccusscaffold_60166710 | Alkaloid | SGD | medium | pass |
| Ccusscaffold_60185360 | Alkaloid | SGD | low | borderline |
| Ccusscaffold_80223210 | Alkaloid | SGD | medium | pass |
| Ccusscaffold_100029180 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_100039850 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_110047060 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_190069270 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_20071650 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_20078490 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_20081530 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_50132250 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_50137790 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_50156160 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_60160340 | Alkaloid | SLS | low | borderline |
| Ccusscaffold_60167470 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_60167480 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_60167560 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_60167590 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_60167620 | Alkaloid | SLS | medium | borderline |
| Ccusscaffold_60192800 | Alkaloid | SLS | medium | pass |
| Ccusscaffold_90245920 | Alkaloid | SLS | low | borderline |
| Ccusscaffold_100021050 | Alkaloid | STR | medium | pass |
| Ccusscaffold_100024280 | Alkaloid | STR | low | borderline |
| Ccusscaffold_100027170 | Alkaloid | STR | low | borderline |
| Ccusscaffold_100029250 | Alkaloid | STR | low | borderline |
| Ccusscaffold_10006310 | Alkaloid | STR | medium | pass |
| Ccusscaffold_110043560 | Alkaloid | STR | low | borderline |
| Ccusscaffold_110049510 | Alkaloid | STR | medium | pass |
| Ccusscaffold_110049560 | Alkaloid | STR | low | borderline |
| Ccusscaffold_110053070 | Alkaloid | STR | low | borderline |
| Ccusscaffold_110055390 | Alkaloid | STR | low | borderline |
| Ccusscaffold_110055410 | Alkaloid | STR | low | borderline |
| Ccusscaffold_120063330 | Alkaloid | STR | medium | pass |
| Ccusscaffold_30087330 | Alkaloid | STR | low | borderline |
| Ccusscaffold_40089280 | Alkaloid | STR | medium | pass |
| Ccusscaffold_40101590 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50114510 | Alkaloid | STR | medium | pass |
| Ccusscaffold_50116120 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50117120 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50121710 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50131890 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50132140 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50132150 | Alkaloid | STR | medium | pass |
| Ccusscaffold_50133090 | Alkaloid | STR | low | borderline |
| Ccusscaffold_50133100 | Alkaloid | STR | medium | pass |
| Ccusscaffold_60166370 | Alkaloid | STR | low | borderline |
| Ccusscaffold_60190310 | Alkaloid | STR | low | borderline |