PlantSME Plant secondary metabolism enzyme database

Cardamine resedifolia (cardamine_resedifolia)

Imported from atlas release summary for Cardamine resedifolia.

1028
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 309 19 BAHD (138) View species results
Phenylpropanoid pathway 230 11 POD (110) View species results
Alkaloid pathway 221 19 NMT (43) View species results
Flavonoid pathway 125 9 UFGT (80) View species results
Rosmarinic acid pathway 77 7 C4H (32) View species results
Steroid pathway 66 11 CAS (22) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1056 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 211 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Cresscaffold105_size2351390005350.1 Alkaloid H6H high pass
Cresscaffold111_size4331150012330.1 Alkaloid H6H medium borderline
Cresscaffold118_size1529870018010.1 Alkaloid H6H low borderline
Cresscaffold125_size1708720024890.1 Alkaloid H6H medium borderline
Cresscaffold137_size1496410035450.1 Alkaloid H6H medium pass
Cresscaffold1518_size474050045270.1 Alkaloid H6H medium borderline
Cresscaffold152_size1431990045970.1 Alkaloid H6H low borderline
Cresscaffold156_size2938980048240.1 Alkaloid H6H low borderline
Cresscaffold156_size2938980048260.1 Alkaloid H6H medium borderline
Cresscaffold1665_size612790055120.1 Alkaloid H6H medium borderline
Cresscaffold1748_size314480060530.1 Alkaloid H6H low borderline
Cresscaffold17_size1772580064480.1 Alkaloid H6H low borderline
Cresscaffold17_size1772580064490.1 Alkaloid H6H low borderline
Cresscaffold17_size1772580064500.1 Alkaloid H6H low borderline
Cresscaffold19_size2411320075430.1 Alkaloid H6H medium borderline
Cresscaffold2033_size168260077590.1 Alkaloid H6H high pass
Cresscaffold2260_size116920087440.1 Alkaloid H6H medium pass
Cresscaffold2463_size169850096080.1 Alkaloid H6H medium borderline
Cresscaffold252_size630660098380.1 Alkaloid H6H low borderline
Cresscaffold256_size1620470099870.1 Alkaloid H6H medium pass
Cresscaffold281_size578710109690.1 Alkaloid H6H low borderline
Cresscaffold2887_size108630111190.1 Alkaloid H6H low borderline
Cresscaffold319_size1981890123540.1 Alkaloid H6H medium pass
Cresscaffold34_size3129240133610.1 Alkaloid H6H low borderline
Cresscaffold34_size3129240133620.1 Alkaloid H6H low borderline
Cresscaffold403_size1309860147100.1 Alkaloid H6H medium pass
Cresscaffold4532_size79640159080.1 Alkaloid H6H low borderline
Cresscaffold48_size1085410166650.1 Alkaloid H6H low borderline
Cresscaffold581_size421020183600.1 Alkaloid H6H medium borderline
Cresscaffold685_size952480200730.1 Alkaloid H6H low borderline
Cresscaffold77_size3771300215140.1 Alkaloid H6H low borderline
Cresscaffold77_size3771300215160.1 Alkaloid H6H low borderline
Cresscaffold874_size587760228200.1 Alkaloid H6H low borderline
Cresscaffold8923_size17400230630.1 Alkaloid H6H low borderline
Cresscaffold950_size258580237080.1 Alkaloid H6H low borderline