PlantSME Plant secondary metabolism enzyme database

Cardamine resedifolia (cardamine_resedifolia)

Imported from atlas release summary for Cardamine resedifolia.

1028
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 309 19 BAHD (138) View species results
Phenylpropanoid pathway 230 11 POD (110) View species results
Alkaloid pathway 221 19 NMT (43) View species results
Flavonoid pathway 125 9 UFGT (80) View species results
Rosmarinic acid pathway 77 7 C4H (32) View species results
Steroid pathway 66 11 CAS (22) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1056 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 211 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Cresscaffold10_size8289330009470.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold10_size8289330010510.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cresscaffold1156_size666940015350.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold127_size759530026220.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold12_size5927740028900.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold1654_size353840054640.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold247_size1180800096340.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold273_size1809000106340.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold273_size1809000106350.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold290_size1193840112330.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold294_size2197850113510.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cresscaffold3132_size244620121050.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Cresscaffold314_size972250121540.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Cresscaffold367_size501130136840.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Cresscaffold43_size2797070155960.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold444_size864260156800.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold511_size775880171340.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold545_size840080177880.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold617_size454510190050.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold625_size888540191340.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold678_size492250199840.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Cresscaffold81_size1134580221140.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold87_size3673640228770.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cresscaffold970_size663830238990.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cresscaffold9_size4160090241980.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH