PlantSME Plant secondary metabolism enzyme database

Citrus ichangensis (citrus_ichangensis)

Imported from atlas release summary for Citrus ichangensis.

1849
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 490 19 BAHD (197) View species results
Alkaloid pathway 460 26 NMT (81) View species results
Phenylpropanoid pathway 410 12 POD (165) View species results
Rosmarinic acid pathway 189 7 C4H (105) View species results
Flavonoid pathway 168 13 UFGT (42) View species results
Steroid pathway 132 15 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2488 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 277 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
Cichscaffold_1090011320.1 Alkaloid 7DLH medium borderline
Cichscaffold_11640017060.1 Alkaloid 7DLH medium borderline
Cichscaffold_11640017070.1 Alkaloid 7DLH medium pass
Cichscaffold_120022130.1 Alkaloid 7DLH low borderline
Cichscaffold_1550052870.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550052870.2 Alkaloid 7DLH medium borderline
Cichscaffold_1550052870.3 Alkaloid 7DLH medium borderline
Cichscaffold_1550052870.4 Alkaloid 7DLH medium borderline
Cichscaffold_1550052870.5 Alkaloid 7DLH medium borderline
Cichscaffold_1550052880.1 Alkaloid 7DLH low borderline
Cichscaffold_1550052890.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550052900.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550052930.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550052940.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550052960.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550052970.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550053080.1 Alkaloid 7DLH medium borderline
Cichscaffold_1550053100.1 Alkaloid 7DLH medium borderline
Cichscaffold_16850063320.1 Alkaloid 7DLH medium borderline
Cichscaffold_16850063330.1 Alkaloid 7DLH medium borderline
Cichscaffold_180073650.3 Alkaloid 7DLH medium borderline
Cichscaffold_180073680.1 Alkaloid 7DLH medium borderline
Cichscaffold_20091780.1 Alkaloid 7DLH medium borderline
Cichscaffold_2580128710.1 Alkaloid 7DLH medium borderline
Cichscaffold_290142910.1 Alkaloid 7DLH medium borderline
Cichscaffold_300150270.1 Alkaloid 7DLH medium borderline
Cichscaffold_3510176620.1 Alkaloid 7DLH medium borderline
Cichscaffold_3510176620.2 Alkaloid 7DLH medium borderline
Cichscaffold_400196130.1 Alkaloid 7DLH medium borderline
Cichscaffold_4450211050.1 Alkaloid 7DLH medium borderline
Cichscaffold_4450211070.1 Alkaloid 7DLH medium borderline
Cichscaffold_460216570.1 Alkaloid 7DLH medium borderline
Cichscaffold_540240460.1 Alkaloid 7DLH medium borderline
Cichscaffold_540240460.2 Alkaloid 7DLH medium borderline
Cichscaffold_600253990.1 Alkaloid 7DLH medium borderline
Cichscaffold_670268440.1 Alkaloid 7DLH medium borderline
Cichscaffold_6840270660.1 Alkaloid 7DLH medium borderline