PlantSME Plant secondary metabolism enzyme database

Citrus ichangensis (citrus_ichangensis)

Imported from atlas release summary for Citrus ichangensis.

1849
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 490 19 BAHD (197) View species results
Alkaloid pathway 460 26 NMT (81) View species results
Phenylpropanoid pathway 410 12 POD (165) View species results
Rosmarinic acid pathway 189 7 C4H (105) View species results
Flavonoid pathway 168 13 UFGT (42) View species results
Steroid pathway 132 15 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2488 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 277 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
Cichscaffold_1110012330.1 Phenylpropanoid CSE medium pass
Cichscaffold_11580016740.1 Phenylpropanoid CSE low borderline
Cichscaffold_11780017930.1 Phenylpropanoid CSE medium pass
Cichscaffold_1240026380.1 Phenylpropanoid CSE medium pass
Cichscaffold_1240026500.1 Phenylpropanoid CSE medium pass
Cichscaffold_1320033670.1 Phenylpropanoid CSE medium pass
Cichscaffold_1320033680.1 Phenylpropanoid CSE medium pass
Cichscaffold_1340035290.1 Phenylpropanoid CSE medium pass
Cichscaffold_1360037100.1 Phenylpropanoid CSE medium pass
Cichscaffold_14590044050.1 Phenylpropanoid CSE medium pass
Cichscaffold_1470044890.1 Phenylpropanoid CSE medium pass
Cichscaffold_1470044990.1 Phenylpropanoid CSE medium pass
Cichscaffold_1480046110.1 Phenylpropanoid CSE medium pass
Cichscaffold_18050074660.1 Phenylpropanoid CSE medium pass
Cichscaffold_200094640.1 Phenylpropanoid CSE medium pass
Cichscaffold_200094650.1 Phenylpropanoid CSE medium pass
Cichscaffold_200094660.1 Phenylpropanoid CSE medium pass
Cichscaffold_200094870.1 Phenylpropanoid CSE medium pass
Cichscaffold_20560098440.1 Phenylpropanoid CSE medium pass
Cichscaffold_210101470.1 Phenylpropanoid CSE medium pass
Cichscaffold_2140103100.1 Phenylpropanoid CSE medium pass
Cichscaffold_2310115310.1 Phenylpropanoid CSE medium pass
Cichscaffold_240119150.1 Phenylpropanoid CSE medium pass
Cichscaffold_240119150.2 Phenylpropanoid CSE medium pass
Cichscaffold_2450122310.1 Phenylpropanoid CSE medium pass
Cichscaffold_2810139430.1 Phenylpropanoid CSE low borderline
Cichscaffold_310156550.1 Phenylpropanoid CSE medium pass
Cichscaffold_350175750.1 Phenylpropanoid CSE medium pass
Cichscaffold_4040197730.1 Phenylpropanoid CSE medium pass
Cichscaffold_4270205950.1 Phenylpropanoid CSE medium pass
Cichscaffold_4270205960.1 Phenylpropanoid CSE medium pass
Cichscaffold_4270205990.1 Phenylpropanoid CSE medium pass
Cichscaffold_5540243090.1 Phenylpropanoid CSE medium pass
Cichscaffold_5540243100.1 Phenylpropanoid CSE medium pass
Cichscaffold_5540243110.1 Phenylpropanoid CSE medium pass
Cichscaffold_560244670.1 Phenylpropanoid CSE medium pass
Cichscaffold_6480264170.1 Phenylpropanoid CSE medium pass
Cichscaffold_74730284800.1 Phenylpropanoid CSE medium pass
Cichscaffold_80291930.1 Phenylpropanoid CSE medium pass
Cichscaffold_86690303180.1 Phenylpropanoid CSE low borderline
Cichscaffold_9010310480.1 Phenylpropanoid CSE medium pass
Cichscaffold_9660317880.1 Phenylpropanoid CSE medium pass
Cichscaffold_980319350.1 Phenylpropanoid CSE medium pass
Cichscaffold_980319360.1 Phenylpropanoid CSE medium pass