PlantSME Plant secondary metabolism enzyme database

Citrus ichangensis (citrus_ichangensis)

Imported from atlas release summary for Citrus ichangensis.

2729
Candidate Protein Records
1849
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 490 19 BAHD (197) View species results
Alkaloid pathway 460 26 NMT (81) View species results
Phenylpropanoid pathway 410 12 POD (165) View species results
Rosmarinic acid pathway 189 7 C4H (105) View species results
Flavonoid pathway 168 13 UFGT (42) View species results
Steroid pathway 132 15 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2488 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 277 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cichscaffold_8570301990.1 Flavonoid F3H medium pass
Cichscaffold_860302170.1 Flavonoid F3H medium borderline
Cichscaffold_860302180.1 Flavonoid F3H medium borderline
Cichscaffold_900310180.1 Flavonoid F3H medium borderline
Cichscaffold_940315380.1 Flavonoid F3H medium borderline
Cichscaffold_940315400.1 Flavonoid F3H medium borderline
Cichscaffold_970318260.1 Flavonoid F3H medium borderline
Cichscaffold_720280420.1 Flavonoid FLS medium pass
Cichscaffold_800294630.1 Flavonoid FLS medium borderline
Cichscaffold_1000002440.1 Flavonoid FNS medium borderline
Cichscaffold_1000002490.1 Flavonoid FNS medium borderline
Cichscaffold_1050007950.1 Flavonoid FNS medium borderline
Cichscaffold_1130014460.1 Flavonoid FNS medium borderline
Cichscaffold_1400039960.1 Flavonoid FNS medium borderline
Cichscaffold_1430042060.1 Flavonoid FNS medium borderline
Cichscaffold_1430042120.1 Flavonoid FNS medium borderline
Cichscaffold_14730045440.1 Flavonoid FNS medium borderline
Cichscaffold_170065220.1 Flavonoid FNS medium borderline
Cichscaffold_1750069620.1 Flavonoid FNS medium borderline
Cichscaffold_180073030.1 Flavonoid FNS medium borderline
Cichscaffold_1980084680.1 Flavonoid FNS medium borderline
Cichscaffold_230112850.1 Flavonoid FNS medium borderline
Cichscaffold_3020152830.1 Flavonoid FNS medium borderline
Cichscaffold_310156260.1 Flavonoid FNS medium borderline
Cichscaffold_32_30165150.1 Flavonoid FNS low borderline
Cichscaffold_3630179990.1 Flavonoid FNS medium borderline
Cichscaffold_370182010.1 Flavonoid FNS medium borderline
Cichscaffold_4020197160.1 Flavonoid FNS medium borderline
Cichscaffold_415_10201140.1 Flavonoid FNS medium borderline
Cichscaffold_440209350.1 Flavonoid FNS medium borderline
Cichscaffold_4480211690.1 Flavonoid FNS medium borderline
Cichscaffold_5930250740.1 Flavonoid FNS medium pass
Cichscaffold_5930250770.1 Flavonoid FNS medium borderline
Cichscaffold_5930250800.1 Flavonoid FNS medium borderline
Cichscaffold_6080255560.1 Flavonoid FNS medium borderline
Cichscaffold_6080255570.1 Flavonoid FNS medium borderline
Cichscaffold_6950272560.1 Flavonoid FNS medium pass
Cichscaffold_7340282590.1 Flavonoid FNS medium borderline
Cichscaffold_7340282600.1 Flavonoid FNS medium borderline
Cichscaffold_7340282620.1 Flavonoid FNS medium pass
Cichscaffold_9840319950.1 Flavonoid FNS medium borderline
Cichscaffold_1240026930.1 Flavonoid IFR medium pass
Cichscaffold_1260028810.1 Flavonoid IFR high pass
Cichscaffold_1260028820.1 Flavonoid IFR high pass
Cichscaffold_1310032290.1 Flavonoid IFR low borderline
Cichscaffold_13160033050.1 Flavonoid IFR medium pass
Cichscaffold_1410041140.1 Flavonoid IFR low borderline
Cichscaffold_1530051960.1 Flavonoid IFR low borderline
Cichscaffold_170065090.1 Flavonoid IFR low borderline
Cichscaffold_1820075140.1 Flavonoid IFR low borderline