PlantSME Plant secondary metabolism enzyme database

Citrus ichangensis (citrus_ichangensis)

Imported from atlas release summary for Citrus ichangensis.

2729
Candidate Protein Records
1849
Pathway-Level Records
5474
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 490 19 BAHD (197) View species results
Alkaloid pathway 460 26 NMT (81) View species results
Phenylpropanoid pathway 410 12 POD (165) View species results
Rosmarinic acid pathway 189 7 C4H (105) View species results
Flavonoid pathway 168 13 UFGT (42) View species results
Steroid pathway 132 15 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2488 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 277 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Cichscaffold_4760221430.1 Alkaloid IO low borderline
Cichscaffold_4970226920.2 Alkaloid IO low borderline
Cichscaffold_4970226920.3 Alkaloid IO low borderline
Cichscaffold_4970226920.4 Alkaloid IO low borderline
Cichscaffold_50228750.1 Alkaloid IO low borderline
Cichscaffold_5030231700.1 Alkaloid IO medium borderline
Cichscaffold_5560243330.1 Alkaloid IO low borderline
Cichscaffold_63180261350.1 Alkaloid IO medium borderline
Cichscaffold_65020265760.1 Alkaloid IO medium borderline
Cichscaffold_6950272540.1 Alkaloid IO medium borderline
Cichscaffold_6950272550.1 Alkaloid IO medium borderline
Cichscaffold_6950272570.1 Alkaloid IO medium borderline
Cichscaffold_71_20279660.1 Alkaloid IO medium borderline
Cichscaffold_7330282450.1 Alkaloid IO low borderline
Cichscaffold_790290720.1 Alkaloid IO medium borderline
Cichscaffold_90308850.1 Alkaloid IO medium borderline
Cichscaffold_1590055720.1 Alkaloid ISY low borderline
Cichscaffold_170065370.1 Alkaloid ISY medium pass
Cichscaffold_170065380.1 Alkaloid ISY high pass
Cichscaffold_20091620.1 Alkaloid ISY medium pass
Cichscaffold_2200107320.1 Alkaloid ISY high pass
Cichscaffold_2200107340.1 Alkaloid ISY high pass
Cichscaffold_2200107350.1 Alkaloid ISY medium pass
Cichscaffold_2200107360.1 Alkaloid ISY medium pass
Cichscaffold_2200107370.1 Alkaloid ISY medium pass
Cichscaffold_2200107380.1 Alkaloid ISY medium pass
Cichscaffold_2490124490.1 Alkaloid ISY medium pass
Cichscaffold_2490124500.1 Alkaloid ISY medium pass
Cichscaffold_260129960.1 Alkaloid ISY high pass
Cichscaffold_3080154950.1 Alkaloid ISY medium pass
Cichscaffold_3080154960.1 Alkaloid ISY medium pass
Cichscaffold_3080154970.1 Alkaloid ISY medium pass
Cichscaffold_420203010.1 Alkaloid ISY low borderline
Cichscaffold_43280207950.1 Alkaloid ISY medium pass
Cichscaffold_480221910.1 Alkaloid ISY medium pass
Cichscaffold_60252140.1 Alkaloid ISY medium pass
Cichscaffold_60252140.2 Alkaloid ISY medium pass
Cichscaffold_60252140.3 Alkaloid ISY medium pass
Cichscaffold_60252180.1 Alkaloid ISY medium pass
Cichscaffold_1410041060.1 Alkaloid LAMT medium borderline
Cichscaffold_1410041060.2 Alkaloid LAMT medium borderline
Cichscaffold_16680061810.1 Alkaloid LAMT medium borderline
Cichscaffold_1680062780.1 Alkaloid LAMT low borderline
Cichscaffold_17430069310.1 Alkaloid LAMT medium borderline
Cichscaffold_2190104890.1 Alkaloid LAMT medium borderline
Cichscaffold_2190104980.1 Alkaloid LAMT medium borderline
Cichscaffold_2190104990.1 Alkaloid LAMT medium borderline
Cichscaffold_2870141570.1 Alkaloid LAMT medium borderline
Cichscaffold_300151060.1 Alkaloid LAMT medium borderline
Cichscaffold_3300167620.1 Alkaloid LAMT medium borderline