PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

3796
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
citrus_limon_GWHPCBFQ062289.1 Flavonoid 4CL medium pass
citrus_limon_GWHPCBFQ006312.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ006313.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ006625.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ009050.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ010104.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ010105.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ010390.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ012912.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ013646.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ016839.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ016840.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ016991.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ017375.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ017380.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ017396.1 Flavonoid ANR high pass
citrus_limon_GWHPCBFQ020480.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ020481.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ020645.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ020942.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ022888.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ026299.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ030421.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ032747.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ036380.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ037801.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ043787.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ043788.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ043789.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ046907.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ046908.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ046909.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ047845.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ047846.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ050243.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ051470.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ051478.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ053235.1 Flavonoid ANR low borderline
citrus_limon_GWHPCBFQ053275.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ054476.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ054481.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ054486.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ056471.1 Flavonoid ANR medium borderline
citrus_limon_GWHPCBFQ005346.1 Flavonoid ANS/LDOX medium pass
citrus_limon_GWHPCBFQ009502.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ009809.1 Flavonoid ANS/LDOX medium pass
citrus_limon_GWHPCBFQ011852.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ013349.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ015246.1 Flavonoid ANS/LDOX medium pass
citrus_limon_GWHPCBFQ015248.1 Flavonoid ANS/LDOX medium borderline