PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

3796
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
citrus_limon_GWHPCBFQ015252.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ015253.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ015257.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ022935.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ022939.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ024890.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ026369.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ026374.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ032273.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ034660.1 Flavonoid ANS/LDOX medium pass
citrus_limon_GWHPCBFQ036851.1 Flavonoid ANS/LDOX low borderline
citrus_limon_GWHPCBFQ037322.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ039042.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ057336.1 Flavonoid ANS/LDOX low borderline
citrus_limon_GWHPCBFQ057611.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ057627.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ057637.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ059622.1 Flavonoid ANS/LDOX medium pass
citrus_limon_GWHPCBFQ060359.1 Flavonoid ANS/LDOX medium borderline
citrus_limon_GWHPCBFQ002272.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ005266.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ005787.1 Flavonoid C4H low borderline
citrus_limon_GWHPCBFQ010041.1 Flavonoid C4H low borderline
citrus_limon_GWHPCBFQ028199.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ028200.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ044570.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ044574.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ045937.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ047704.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ047708.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ049326.1 Flavonoid C4H medium borderline
citrus_limon_GWHPCBFQ055006.1 Flavonoid C4H low borderline
citrus_limon_GWHPCBFQ006705.1 Flavonoid CHI medium pass
citrus_limon_GWHPCBFQ010459.1 Flavonoid CHI medium pass
citrus_limon_GWHPCBFQ023594.1 Flavonoid CHI low borderline
citrus_limon_GWHPCBFQ027020.1 Flavonoid CHI low borderline
citrus_limon_GWHPCBFQ046269.1 Flavonoid CHI medium pass
citrus_limon_GWHPCBFQ046451.1 Flavonoid CHI medium pass
citrus_limon_GWHPCBFQ049676.1 Flavonoid CHI medium pass
citrus_limon_GWHPCBFQ049874.1 Flavonoid CHI medium pass
citrus_limon_GWHPCBFQ002788.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ005700.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ006958.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ010689.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ016328.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ016329.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ016330.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ016446.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ016481.1 Flavonoid CHS medium pass
citrus_limon_GWHPCBFQ016485.1 Flavonoid CHS medium pass