PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1051
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Ccapcontig080300057890.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig086520071530.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig087220072790.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig095570092420.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig096690097520.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig097110099660.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig097110099670.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig097520101250.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig100510112170.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig100520112180.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig105470133080.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig110740154290.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig111110156060.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig111540159270.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig111540159280.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig111540159290.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig112900163970.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig112900163990.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig118440179280.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig120090182740.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig123490190510.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig124470194390.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig135030222620.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig144270244710.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig149970262680.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig150320264240.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig151990270290.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig163210289370.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig077880052760.1 Alkaloid COR low borderline
Ccapcontig087190072680.1 Alkaloid COR medium pass
Ccapcontig096760098360.1 Alkaloid COR medium pass
Ccapcontig107090138870.1 Alkaloid COR low borderline
Ccapcontig111310157720.1 Alkaloid COR medium pass
Ccapcontig111310157730.1 Alkaloid COR medium pass
Ccapcontig136630225610.1 Alkaloid COR medium pass
Ccapcontig136630225620.1 Alkaloid COR low borderline
Ccapcontig164510291940.1 Alkaloid COR low borderline
Ccapcontig060970022600.1 Alkaloid CYP719 low borderline
Ccapcontig075630047250.1 Alkaloid CYP719 medium borderline
Ccapcontig092000082160.1 Alkaloid CYP719 medium borderline
Ccapcontig111560159460.1 Alkaloid CYP719 medium borderline
Ccapcontig157570279880.1 Alkaloid CYP719 low borderline
Ccapcontig005540001590.1 Alkaloid CYP80B1 medium borderline
Ccapcontig061760024500.1 Alkaloid CYP80B1 medium borderline
Ccapcontig129110210820.1 Alkaloid CYP80B1 medium borderline
Ccapcontig129110210830.1 Alkaloid CYP80B1 medium borderline
Ccapcontig129140210850.1 Alkaloid CYP80B1 medium borderline
Ccapcontig129140210860.1 Alkaloid CYP80B1 medium borderline
Ccapcontig144540246390.1 Alkaloid CYP80B1 medium borderline
Ccapcontig059980020940.1 Alkaloid G8O/G8H medium borderline