PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1051
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Ccapcontig061760024520.1 Alkaloid G8O/G8H medium borderline
Ccapcontig062990026330.1 Alkaloid G8O/G8H low borderline
Ccapcontig068910034480.1 Alkaloid G8O/G8H medium borderline
Ccapcontig089250076140.1 Alkaloid G8O/G8H medium borderline
Ccapcontig095660092930.1 Alkaloid G8O/G8H low borderline
Ccapcontig100780113340.1 Alkaloid G8O/G8H medium borderline
Ccapcontig102460118290.1 Alkaloid G8O/G8H medium borderline
Ccapcontig102460118300.1 Alkaloid G8O/G8H medium borderline
Ccapcontig104320128770.1 Alkaloid G8O/G8H medium borderline
Ccapcontig111320157910.1 Alkaloid G8O/G8H medium borderline
Ccapcontig119250180900.1 Alkaloid G8O/G8H low borderline
Ccapcontig129160210900.1 Alkaloid G8O/G8H medium borderline
Ccapcontig129160210910.1 Alkaloid G8O/G8H medium borderline
Ccapcontig129260211150.1 Alkaloid G8O/G8H low borderline
Ccapcontig137320228830.1 Alkaloid G8O/G8H medium borderline
Ccapcontig164800292190.1 Alkaloid G8O/G8H medium borderline
Ccapcontig004810001390.1 Alkaloid GES medium pass
Ccapcontig050140014890.1 Alkaloid GES medium pass
Ccapcontig062200025230.1 Alkaloid GES low borderline
Ccapcontig067140031250.1 Alkaloid GES medium pass
Ccapcontig073860043990.1 Alkaloid GES low borderline
Ccapcontig073870044000.1 Alkaloid GES medium pass
Ccapcontig073880044020.1 Alkaloid GES low borderline
Ccapcontig077900053000.1 Alkaloid GES medium pass
Ccapcontig079880057330.1 Alkaloid GES medium pass
Ccapcontig080830059200.1 Alkaloid GES low borderline
Ccapcontig080830059210.1 Alkaloid GES medium pass
Ccapcontig080830059220.1 Alkaloid GES low borderline
Ccapcontig084420067850.1 Alkaloid GES medium pass
Ccapcontig084530067970.1 Alkaloid GES medium pass
Ccapcontig102710119170.1 Alkaloid GES low borderline
Ccapcontig106200136820.1 Alkaloid GES medium pass
Ccapcontig106210136830.1 Alkaloid GES medium pass
Ccapcontig106220136850.1 Alkaloid GES low borderline
Ccapcontig107200139760.1 Alkaloid GES low borderline
Ccapcontig108790145700.1 Alkaloid GES medium pass
Ccapcontig108800145710.1 Alkaloid GES low borderline
Ccapcontig108810145730.1 Alkaloid GES medium pass
Ccapcontig108930146890.1 Alkaloid GES low borderline
Ccapcontig121090185340.1 Alkaloid GES medium pass
Ccapcontig125140197890.1 Alkaloid GES medium pass
Ccapcontig131350213330.1 Alkaloid GES medium pass
Ccapcontig134840222140.1 Alkaloid GES medium pass
Ccapcontig137530229790.1 Alkaloid GES medium pass
Ccapcontig137600229940.1 Alkaloid GES medium pass
Ccapcontig144060244100.1 Alkaloid GES medium pass
Ccapcontig145750254510.1 Alkaloid GES medium pass
Ccapcontig145750254520.1 Alkaloid GES medium pass
Ccapcontig145760254540.1 Alkaloid GES medium pass
Ccapcontig147270258140.1 Alkaloid GES medium pass