PlantSME Plant secondary metabolism enzyme database

Fissidens javanicus (fissidens_javanicus)

Imported from atlas release summary for Fissidens javanicus.

686
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (92) View species results
Terpenoid pathway 169 18 BAHD (72) View species results
Alkaloid pathway 136 16 PYKS (27) View species results
Flavonoid pathway 93 10 CHS (28) View species results
Rosmarinic acid pathway 69 7 C4H (25) View species results
Steroid pathway 36 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 666 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 145 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Fjavscaffold_80253260 Alkaloid IO low borderline
Fjavscaffold_90255790 Alkaloid IO medium borderline
Fjavscaffold_90257490 Alkaloid IO medium borderline
Fjavscaffold_90261430 Alkaloid IO low borderline
Fjavscaffold_10000940 Alkaloid ISY low borderline
Fjavscaffold_30151800 Alkaloid ISY low borderline
Fjavscaffold_90256880 Alkaloid ISY medium pass
Fjavscaffold_90267860 Alkaloid ISY low borderline
Fjavscaffold_100027770 Alkaloid LAMT low borderline
Fjavscaffold_20110620 Alkaloid LAMT low borderline
Fjavscaffold_40153510 Alkaloid LAMT medium borderline
Fjavscaffold_40153560 Alkaloid LAMT medium borderline
Fjavscaffold_40154180 Alkaloid LAMT medium borderline
Fjavscaffold_40168100 Alkaloid LAMT medium borderline
Fjavscaffold_60198580 Alkaloid LAMT medium borderline
Fjavscaffold_60212990 Alkaloid LAMT medium pass
Fjavscaffold_50191450 Alkaloid MPO medium pass
Fjavscaffold_60202620 Alkaloid MPO high pass
Fjavscaffold_70229380 Alkaloid MPO high pass
Fjavscaffold_70235560 Alkaloid MPO medium pass
Fjavscaffold_10002400 Alkaloid NCS medium borderline
Fjavscaffold_100046280 Alkaloid NCS medium borderline
Fjavscaffold_120064530 Alkaloid NCS medium borderline
Fjavscaffold_20096090 Alkaloid NCS low borderline
Fjavscaffold_30137270 Alkaloid NCS low borderline
Fjavscaffold_30151610 Alkaloid NCS low borderline
Fjavscaffold_40161230 Alkaloid NCS medium borderline
Fjavscaffold_90262920 Alkaloid NCS medium borderline
Fjavscaffold_100025380 Alkaloid NMT low borderline
Fjavscaffold_10002690 Alkaloid NMT low borderline
Fjavscaffold_100029870 Alkaloid NMT medium pass
Fjavscaffold_100032210 Alkaloid NMT medium pass
Fjavscaffold_100032530 Alkaloid NMT low borderline
Fjavscaffold_100032560 Alkaloid NMT low borderline
Fjavscaffold_10005280 Alkaloid NMT low borderline
Fjavscaffold_10019830 Alkaloid NMT medium pass
Fjavscaffold_110047630 Alkaloid NMT medium pass
Fjavscaffold_110049910 Alkaloid NMT medium pass
Fjavscaffold_110050300 Alkaloid NMT low borderline
Fjavscaffold_110052000 Alkaloid NMT medium borderline
Fjavscaffold_110054860 Alkaloid NMT medium pass
Fjavscaffold_120057670 Alkaloid NMT low borderline
Fjavscaffold_120061310 Alkaloid NMT medium pass
Fjavscaffold_130067940 Alkaloid NMT medium pass
Fjavscaffold_20091810 Alkaloid NMT low borderline
Fjavscaffold_20093090 Alkaloid NMT low borderline
Fjavscaffold_20106530 Alkaloid NMT low borderline
Fjavscaffold_20111590 Alkaloid NMT medium borderline
Fjavscaffold_20116050 Alkaloid NMT medium pass
Fjavscaffold_30121270 Alkaloid NMT low borderline