PlantSME Plant secondary metabolism enzyme database

Fissidens javanicus (fissidens_javanicus)

Imported from atlas release summary for Fissidens javanicus.

686
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (92) View species results
Terpenoid pathway 169 18 BAHD (72) View species results
Alkaloid pathway 136 16 PYKS (27) View species results
Flavonoid pathway 93 10 CHS (28) View species results
Rosmarinic acid pathway 69 7 C4H (25) View species results
Steroid pathway 36 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 666 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 145 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Fjavscaffold_30133960 Alkaloid NMT medium borderline
Fjavscaffold_30137540 Alkaloid NMT medium pass
Fjavscaffold_30137680 Alkaloid NMT medium pass
Fjavscaffold_30140140 Alkaloid NMT low borderline
Fjavscaffold_30147480 Alkaloid NMT medium borderline
Fjavscaffold_30149780 Alkaloid NMT medium pass
Fjavscaffold_40153660 Alkaloid NMT low borderline
Fjavscaffold_40160580 Alkaloid NMT medium pass
Fjavscaffold_40160780 Alkaloid NMT low borderline
Fjavscaffold_40162800 Alkaloid NMT medium pass
Fjavscaffold_40167150 Alkaloid NMT medium borderline
Fjavscaffold_40171040 Alkaloid NMT medium pass
Fjavscaffold_50176220 Alkaloid NMT medium borderline
Fjavscaffold_50183050 Alkaloid NMT low borderline
Fjavscaffold_50186690 Alkaloid NMT medium pass
Fjavscaffold_50188680 Alkaloid NMT low borderline
Fjavscaffold_50188900 Alkaloid NMT low borderline
Fjavscaffold_50191640 Alkaloid NMT medium pass
Fjavscaffold_50192780 Alkaloid NMT medium borderline
Fjavscaffold_50192790 Alkaloid NMT medium borderline
Fjavscaffold_50193850 Alkaloid NMT medium pass
Fjavscaffold_60198100 Alkaloid NMT low borderline
Fjavscaffold_60199750 Alkaloid NMT medium pass
Fjavscaffold_60199770 Alkaloid NMT medium pass
Fjavscaffold_60209360 Alkaloid NMT medium borderline
Fjavscaffold_60212470 Alkaloid NMT medium borderline
Fjavscaffold_60213690 Alkaloid NMT low borderline
Fjavscaffold_70227240 Alkaloid NMT low borderline
Fjavscaffold_70227580 Alkaloid NMT medium pass
Fjavscaffold_70227890 Alkaloid NMT low borderline
Fjavscaffold_80237690 Alkaloid NMT low borderline
Fjavscaffold_80242540 Alkaloid NMT low borderline
Fjavscaffold_80248420 Alkaloid NMT medium borderline
Fjavscaffold_80253650 Alkaloid NMT low borderline
Fjavscaffold_90262430 Alkaloid NMT low borderline
Fjavscaffold_90269510 Alkaloid NMT low borderline
Fjavscaffold_90272360 Alkaloid NMT medium pass
Fjavscaffold_10013280 Alkaloid PMT medium pass
Fjavscaffold_40168810 Alkaloid PMT medium pass
Fjavscaffold_50178290 Alkaloid PMT medium pass
Fjavscaffold_50192230 Alkaloid PMT medium borderline
Fjavscaffold_80242680 Alkaloid PMT low borderline
Fjavscaffold_100027810 Alkaloid PYKS low borderline
Fjavscaffold_100029500 Alkaloid PYKS high pass
Fjavscaffold_100030870 Alkaloid PYKS high pass
Fjavscaffold_100038140 Alkaloid PYKS high pass
Fjavscaffold_100038150 Alkaloid PYKS medium pass
Fjavscaffold_100038160 Alkaloid PYKS high pass
Fjavscaffold_10009050 Alkaloid PYKS high pass
Fjavscaffold_10009090 Alkaloid PYKS medium pass