PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
Reset
Gene Pathway Family Confidence Status
GobtHiC_scaffold_70220820 Phenylpropanoid 4CL medium pass
GobtHiC_scaffold_70221570 Phenylpropanoid 4CL medium pass
GobtHiC_scaffold_80263910 Phenylpropanoid 4CL medium pass
GobtHiC_scaffold_80263920 Phenylpropanoid 4CL medium pass
GobtHiC_scaffold_80267340 Phenylpropanoid 4CL low borderline
GobtHiC_scaffold_90292880 Phenylpropanoid 4CL low borderline
GobtHiC_scaffold_100031360 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_10005780 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_110052320 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_110053000 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_110057510 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_110058120 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_110058230 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_11910060190 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_120064240 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_120069710 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_120074580 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_120075850 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_20102330 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_20106810 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_30150780 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_30159820 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_30160840 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_40177930 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_50185250 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_50189570 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_60199450 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_6930216190 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_70220820 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_70221570 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_80263910 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_80263920 Rosmarinic Acid 4CL medium pass
GobtHiC_scaffold_80267340 Rosmarinic Acid 4CL low borderline
GobtHiC_scaffold_90292880 Rosmarinic Acid 4CL low borderline