Grimmia obtusifolia (grimmia_obtusifolia)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.81% Terpenoid pathway 24.13% Alkaloid pathway 20.82% Flavonoid pathway 12.62% Rosmarinic acid pathway 9.46% Steroid pathway 6.15%

Family Distribution

634 Candidate Genes

C4H 7.21% C3'H/CYP98A 5.84% BAHD 5.72% POD 5.36% 4CL 5.01% CYP76 4.05% NMT 3.75% IFS 3.34%

Other Families 59.71%

More Families (94)

T3O 41 2.44% STR 41 2.44% DWF4/CYP90B1 41 2.44% F3H 40 2.38% IFR 40 2.38% F3'H/CYP75B 35 2.09% BR6OX2/CYP85A2 34 2.03% PAL 30 1.79% UGT 30 1.79% GS 29 1.73% CODM/T6ODM 28 1.67% 7DLGT 28 1.67% UFGT 28 1.67% PYKS 27 1.61% IO 24 1.43% CYP71 21 1.25% CAD 19 1.13% H6H 18 1.07% SMT1/SMT2/SMT3 18 1.07% CHS 17 1.01% T16H 15 0.89% TRI/TRII 15 0.89% F3'5'H/CYP75A 15 0.89% HCT 15 0.89% LAC 15 0.89% RAS 15 0.89% COMT 14 0.83% G8O/G8H 13 0.77% SLS 13 0.77% CAS 12 0.72% CNMT 11 0.66% CSE 11 0.66% SGD 10 0.6% FNS 10 0.6% 7DLH 9 0.54% 8HGO 9 0.54% CCR 9 0.54% COR 8 0.48% 16OMT 8 0.48% ANR 8 0.48% CYP90D1 8 0.48% NCS 7 0.42% TDC 7 0.42% SQS/FDFT1 7 0.42% PMT 6 0.36% DET2 6 0.36% CPD/CYP90A1 6 0.36% MVK 6 0.36% AACT 6 0.36% CYP80B1 5 0.3% ANS/LDOX 5 0.3% F5H/CYP84A 5 0.3% CPR 5 0.3% BR6OX1/CYP85A1 5 0.3% GGPPS 5 0.3% LAMT 4 0.24% CYP719 4 0.24% BBE 4 0.24% ADC 4 0.24% FLS 4 0.24% TAT 4 0.24% DWF5 4 0.24% SQE 4 0.24% ROT3/CYP90C1 4 0.24% MPO 3 0.18% DFR 3 0.18% CHI 3 0.18% SMO1/SMO2 3 0.18% MVD 3 0.18% 6OMT_4OMT_SOMT 2 0.12% ISY 2 0.12% TYDC_DDC 2 0.12% CCoAOMT 2 0.12% HPPR 2 0.12% CYP51G1 2 0.12% HYD1 2 0.12% FPPS 2 0.12% HDS/IspG 2 0.12% MCT/IspD 2 0.12% DXR 2 0.12% MDS/IspF 2 0.12% HDR/IspH 2 0.12% GES 1 0.06% DWF7 1 0.06% DWF1 1 0.06% CPI1 1 0.06% FK 1 0.06% IDI 1 0.06% CMK/IspE 1 0.06% TPS 1 0.06% DXS 1 0.06% HMGR 1 0.06% PMK 1 0.06% HMGS 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	170	11	POD (85)	View species results
Terpenoid pathway	153	19	BAHD (60)	View species results
Alkaloid pathway	132	16	NMT (22)	View species results
Flavonoid pathway	80	9	UFGT (23)	View species results
Rosmarinic acid pathway	60	7	C4H (19)	View species results
Steroid pathway	39	13	CAS (9)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	643	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	126	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: UGT

Gene	Pathway	Family	Confidence	Status	Best Target
GobtHiC_scaffold_100028310	Terpenoid	UGT	medium	pass	UGT__00105__sp_Q9SK82_U85A1_ARATH
GobtHiC_scaffold_100029700	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_100032240	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_100033800	Terpenoid	UGT	medium	pass	UGT__00012__sp_A0A0M4KE44_CGT_MANIN
GobtHiC_scaffold_100033820	Terpenoid	UGT	medium	pass	UGT__00022__sp_B2XBQ5_85A19_PRUDU
GobtHiC_scaffold_100037050	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_100038920	Terpenoid	UGT	low	borderline	UGT__00066__sp_P0DO73_GT724_SIRGR
GobtHiC_scaffold_10015600	Terpenoid	UGT	medium	pass	UGT__00076__sp_Q8L7M0_TUN_ARATH
GobtHiC_scaffold_110051790	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_120066390	Terpenoid	UGT	medium	pass	UGT__00001__sp_A0A067YB04_UGT1_PUEML
GobtHiC_scaffold_130080580	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_20101230	Terpenoid	UGT	medium	pass	UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
GobtHiC_scaffold_20106010	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_20107310	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_20115510	Terpenoid	UGT	medium	pass	UGT__00032__sp_F8WKW1_UGT2_GARJA
GobtHiC_scaffold_20123560	Terpenoid	UGT	medium	pass	UGT__00061__sp_P0DO49_U71K3_FRAAN
GobtHiC_scaffold_30152370	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_40178390	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_50182670	Terpenoid	UGT	low	borderline	UGT__00062__sp_P0DO66_GT721_SIRGR
GobtHiC_scaffold_50188070	Terpenoid	UGT	medium	pass	UGT__00034__sp_F8WLS6_UGT6_CATRO
GobtHiC_scaffold_50197040	Terpenoid	UGT	medium	pass	UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
GobtHiC_scaffold_60209740	Terpenoid	UGT	medium	pass	UGT__00002__sp_A0A067YBQ3_UGT13_PUEML
GobtHiC_scaffold_70217930	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_70219030	Terpenoid	UGT	medium	pass	UGT__00108__sp_Q9SYK9_U74E2_ARATH
GobtHiC_scaffold_80254580	Terpenoid	UGT	low	borderline	UGT__00105__sp_Q9SK82_U85A1_ARATH
GobtHiC_scaffold_80254590	Terpenoid	UGT	medium	pass	UGT__00023__sp_B3TKC8_88F1G_MALDO
GobtHiC_scaffold_80270290	Terpenoid	UGT	medium	pass	UGT__00105__sp_Q9SK82_U85A1_ARATH
GobtHiC_scaffold_90278430	Terpenoid	UGT	low	borderline	UGT__00094__sp_Q9LSY4_U71B8_ARATH
GobtHiC_scaffold_90279610	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH
GobtHiC_scaffold_90285770	Terpenoid	UGT	medium	pass	UGT__00103__sp_Q9M156_U72B1_ARATH