PlantSME Plant secondary metabolism enzyme database

Grimmia obtusifolia (grimmia_obtusifolia)

Imported from atlas release summary for Grimmia obtusifolia.

634
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 170 11 POD (85) View species results
Terpenoid pathway 153 19 BAHD (60) View species results
Alkaloid pathway 132 16 NMT (22) View species results
Flavonoid pathway 80 9 UFGT (23) View species results
Rosmarinic acid pathway 60 7 C4H (19) View species results
Steroid pathway 39 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 643 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
GobtHiC_scaffold_10000620 Flavonoid F3H medium borderline
GobtHiC_scaffold_100025640 Flavonoid F3H medium borderline
GobtHiC_scaffold_100027120 Flavonoid F3H medium borderline
GobtHiC_scaffold_100027510 Flavonoid F3H medium pass
GobtHiC_scaffold_10003110 Flavonoid F3H low borderline
GobtHiC_scaffold_100033550 Flavonoid F3H medium borderline
GobtHiC_scaffold_100033640 Flavonoid F3H low borderline
GobtHiC_scaffold_100036440 Flavonoid F3H medium borderline
GobtHiC_scaffold_100039670 Flavonoid F3H medium borderline
GobtHiC_scaffold_110048610 Flavonoid F3H medium borderline
GobtHiC_scaffold_110055430 Flavonoid F3H medium borderline
GobtHiC_scaffold_120060760 Flavonoid F3H low borderline
GobtHiC_scaffold_120065930 Flavonoid F3H medium borderline
GobtHiC_scaffold_120066010 Flavonoid F3H medium borderline
GobtHiC_scaffold_120073200 Flavonoid F3H medium borderline
GobtHiC_scaffold_120077600 Flavonoid F3H medium pass
GobtHiC_scaffold_130087720 Flavonoid F3H medium pass
GobtHiC_scaffold_140095180 Flavonoid F3H low borderline
GobtHiC_scaffold_200128030 Flavonoid F3H low borderline
GobtHiC_scaffold_20117670 Flavonoid F3H medium borderline
GobtHiC_scaffold_30138820 Flavonoid F3H medium borderline
GobtHiC_scaffold_30153470 Flavonoid F3H medium borderline
GobtHiC_scaffold_40164940 Flavonoid F3H medium borderline
GobtHiC_scaffold_50192970 Flavonoid F3H low borderline
GobtHiC_scaffold_50194920 Flavonoid F3H low borderline
GobtHiC_scaffold_60211260 Flavonoid F3H medium borderline
GobtHiC_scaffold_60213610 Flavonoid F3H medium borderline
GobtHiC_scaffold_70219580 Flavonoid F3H medium borderline
GobtHiC_scaffold_70222720 Flavonoid F3H medium borderline
GobtHiC_scaffold_70238870 Flavonoid F3H medium borderline
GobtHiC_scaffold_80256140 Flavonoid F3H medium pass
GobtHiC_scaffold_80257330 Flavonoid F3H medium borderline
GobtHiC_scaffold_80257400 Flavonoid F3H medium borderline
GobtHiC_scaffold_80268230 Flavonoid F3H medium borderline
GobtHiC_scaffold_80269950 Flavonoid F3H medium borderline
GobtHiC_scaffold_90280860 Flavonoid F3H medium borderline
GobtHiC_scaffold_90288000 Flavonoid F3H low borderline
GobtHiC_scaffold_90290680 Flavonoid F3H medium borderline
GobtHiC_scaffold_90297720 Flavonoid F3H medium borderline
GobtHiC_scaffold_90300140 Flavonoid F3H medium pass